Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S1P61966 OR4K17-201ENST00000315543 1032 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 RNA5SP509-201ENST00000364577 119 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 RNA5SP22-201ENST00000365393 109 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 SNORA11F-201ENST00000408237 128 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 SEPT7P8-201ENST00000413308 775 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S1P61966 AL139095.3-201ENST00000419672 1203 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 RPS29P17-201ENST00000430795 166 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 RPL5P30-201ENST00000465511 891 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 AC025674.1-201ENST00000507074 324 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 ATP1B1P1-201ENST00000509767 915 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 AC093840.1-201ENST00000511599 336 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 AP002981.1-201ENST00000517692 975 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 AC010476.1-201ENST00000519111 851 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S1P61966 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S1P61966 AC025175.1-201ENST00000606482 759 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 AC140479.6-201ENST00000633535 357 ntBASIC4.43□□□□□ -1.7
AP1S1P61966 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S1P61966 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.43□□□□□ -1.7
AP1S1P61966 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
AP1S1P61966 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S1P61966 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S1P61966 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S1P61966 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S1P61966 VPS35P1-201ENST00000563400 1518 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 MIR331-201ENST00000362302 94 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 RNU1-94P-201ENST00000362627 173 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 RNA5SP443-201ENST00000363083 132 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 RNU1-20P-201ENST00000363314 162 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 U3.22-201ENST00000391120 215 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S1P61966 RN7SKP216-201ENST00000411050 312 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S1P61966 RANP7-201ENST00000418085 644 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 PTP4A1P1-201ENST00000420539 515 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S1P61966 FHP1-201ENST00000442741 703 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
AP1S1P61966 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S1P61966 AC011276.1-201ENST00000469688 323 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 RN7SL41P-201ENST00000476144 297 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 RPS27AP16-201ENST00000492222 470 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.42□□□□□ -1.7
AP1S1P61966 AL352979.3-201ENST00000553515 247 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S1P61966 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S1P61966 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S1P61966 AF230666.2-201ENST00000602328 725 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S1P61966 AC091979.2-201ENST00000607514 214 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 AL023583.1-201ENST00000607518 1143 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
AP1S1P61966 AC009237.17-201ENST00000618111 748 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S1P61966 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S1P61966 AP002967.1-201ENST00000624203 539 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S1P61966 NAMPTP1-201ENST00000440465 2514 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
AP1S1P61966 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S1P61966 DDX18P4-201ENST00000511690 1966 ntBASIC4.42□□□□□ -1.7
AP1S1P61966 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.41□□□□□ -1.7
AP1S1P61966 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S1P61966 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S1P61966 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
AP1S1P61966 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S1P61966 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.41□□□□□ -1.7
AP1S1P61966 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S1P61966 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S1P61966 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
AP1S1P61966 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.41□□□□□ -1.7
AP1S1P61966 AC107027.3-201ENST00000565095 3473 ntBASIC4.41□□□□□ -1.7
AP1S1P61966 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
AP1S1P61966 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
AP1S1P61966 AC016397.1-201ENST00000412463 242 ntBASIC4.41□□□□□ -1.7
AP1S1P61966 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S1P61966 AL590609.2-201ENST00000421430 368 ntBASIC4.41□□□□□ -1.7
AP1S1P61966 AL592293.2-201ENST00000422292 996 ntBASIC4.41□□□□□ -1.7
AP1S1P61966 AC004448.2-201ENST00000422360 586 ntBASIC4.41□□□□□ -1.7
AP1S1P61966 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S1P61966 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms