Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPS3AP61247 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPS3AP61247 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPS3AP61247 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.9□□□□□ -1.63
RPS3AP61247 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.9□□□□□ -1.63
RPS3AP61247 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RPS3AP61247 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RPS3AP61247 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RPS3AP61247 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPS3AP61247 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.9□□□□□ -1.63
RPS3AP61247 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.9□□□□□ -1.63
RPS3AP61247 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPS3AP61247 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPS3AP61247 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RPS3AP61247 RARSP1-201ENST00000542842 1418 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RPS3AP61247 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
RPS3AP61247 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 RNU1-77P-201ENST00000390868 162 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 HSPA8P15-201ENST00000401676 786 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 MIR1286-201ENST00000408112 78 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.89□□□□□ -1.63
RPS3AP61247 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 AC007738.1-201ENST00000413892 348 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 LIPT1P1-201ENST00000415870 1186 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AC019050.1-201ENST00000418508 492 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 FAM96AP1-201ENST00000430879 482 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.89□□□□□ -1.63
RPS3AP61247 RPS26P30-201ENST00000443431 335 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 RN7SL515P-201ENST00000463999 297 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 NIFKP7-201ENST00000503365 834 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 AC119751.1-201ENST00000513357 765 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 SCARNA20.4-201ENST00000516969 131 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 BLZF2P-201ENST00000553776 1130 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 CYP2C60P-201ENST00000566088 139 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.89□□□□□ -1.63
RPS3AP61247 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 FKBP1AP1-201ENST00000594588 318 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 AC023762.1-201ENST00000603280 584 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.89□□□□□ -1.63
RPS3AP61247 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 AC009318.3-201ENST00000616916 503 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AC073342.3-201ENST00000624211 193 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 AP003072.4-201ENST00000624580 310 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.89□□□□□ -1.63
RPS3AP61247 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPS3AP61247 ASNSP1-204ENST00000641977 1664 ntBASIC4.89□□□□□ -1.63
RPS3AP61247 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPS3AP61247 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPS3AP61247 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPS3AP61247 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPS3AP61247 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RPS3AP61247 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RPS3AP61247 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
RPS3AP61247 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RPS3AP61247 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPS3AP61247 RNA5SP335-201ENST00000363817 110 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPS3AP61247 AL603865.2-201ENST00000401679 213 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RPS3AP61247 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.88□□□□□ -1.63
RPS3AP61247 RNU6-77P-201ENST00000410554 91 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.88□□□□□ -1.63
RPS3AP61247 AC004690.1-201ENST00000418216 328 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 E2F6P2-201ENST00000420708 748 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
RPS3AP61247 MTND2P9-201ENST00000422293 931 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 RPL7L1P9-201ENST00000431298 745 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 RPS20P1-201ENST00000434853 354 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 TMX2P1-201ENST00000436507 708 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 UBE2V1P5-201ENST00000440070 405 ntBASIC4.88□□□□□ -1.63
RPS3AP61247 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPS3AP61247 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.88□□□□□ -1.63
RPS3AP61247 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.88□□□□□ -1.63
RPS3AP61247 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms