Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CLDN18P56856 CYP1D1P-201ENST00000416662 1433 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AC135352.1-201ENST00000506173 1418 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 OR10J6P-201ENST00000289731 930 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 RNU1-32P-201ENST00000363937 159 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 MIR129-1-201ENST00000384972 72 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CLDN18P56856 RN7SKP199-201ENST00000410325 305 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 RPL12P34-201ENST00000424532 479 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN18P56856 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 YWHAZP2-201ENST00000440317 728 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 MRPL48P1-201ENST00000445390 636 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 GEMIN8P3-201ENST00000445417 720 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 ARL2BPP10-201ENST00000446487 531 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN18P56856 RNU6-1218P-201ENST00000458990 108 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 SCARNA10-201ENST00000459255 330 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 RPL5P13-201ENST00000462840 709 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AP001781.1-201ENST00000530977 207 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 MIR5096-201ENST00000583713 70 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 AC020915.5-201ENST00000596836 964 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 MTCO2P22-201ENST00000603246 681 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AC093765.1-201ENST00000603758 881 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AC010200.2-201ENST00000605098 235 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AC017076.1-201ENST00000607613 578 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN18P56856 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN18P56856 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN18P56856 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLDN18P56856 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 AL592148.3-201ENST00000608771 2646 ntBASIC4.16□□□□□ -1.74
CLDN18P56856 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CLDN18P56856 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN18P56856 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN18P56856 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CLDN18P56856 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN18P56856 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN18P56856 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
CLDN18P56856 AC107068.1-201ENST00000563286 4218 ntBASIC4.15□□□□□ -1.74
CLDN18P56856 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN18P56856 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.15□□□□□ -1.74
CLDN18P56856 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.15□□□□□ -1.74
CLDN18P56856 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC021146.4-201ENST00000309229 279 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDN18P56856 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLDN18P56856 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 MIR92A2-201ENST00000385299 75 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDN18P56856 UQCRBP1-201ENST00000421129 336 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 RPEP3-201ENST00000425462 676 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 CENPIP1-201ENST00000425713 902 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 DNAJC19P7-201ENST00000428811 344 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 CNOT7P1-201ENST00000429006 852 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC068287.1-201ENST00000430283 295 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN18P56856 AC104651.2-201ENST00000447549 528 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AL162591.2-201ENST00000449634 317 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 IFNWP4-201ENST00000453148 294 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 snoU13.1-201ENST00000459157 104 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC020890.1-201ENST00000491837 504 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC098799.3-201ENST00000506095 438 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC090819.1-201ENST00000523800 1111 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN18P56856 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.15□□□□□ -1.75
CLDN18P56856 AC069061.3-201ENST00000582254 823 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 MIR4715-201ENST00000584117 79 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN18P56856 AL391834.1-201ENST00000609609 560 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC100847.1-201ENST00000611316 481 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC015871.5-202ENST00000623252 701 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 AC074029.4-201ENST00000624796 1859 ntBASIC4.15□□□□□ -1.75
CLDN18P56856 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN18P56856 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms