Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 AC110792.3-201ENST00000595906 1614 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDH4P55283 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDH4P55283 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
CDH4P55283 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 RNA5SP443-201ENST00000363083 132 ntBASIC4.63□□□□□ -1.67
CDH4P55283 MT-TP-201ENST00000387461 68 ntBASIC4.63□□□□□ -1.67
CDH4P55283 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDH4P55283 AL359643.1-201ENST00000404109 423 ntBASIC4.63□□□□□ -1.67
CDH4P55283 RN7SKP216-201ENST00000411050 312 ntBASIC4.63□□□□□ -1.67
CDH4P55283 ELOCP19-201ENST00000411919 318 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH4P55283 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH4P55283 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 AC007064.3-201ENST00000422608 359 ntBASIC4.63□□□□□ -1.67
CDH4P55283 RPL21P91-201ENST00000429231 479 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 AC093716.1-201ENST00000435923 377 ntBASIC4.63□□□□□ -1.67
CDH4P55283 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 RPL31P20-201ENST00000449593 360 ntBASIC4.63□□□□□ -1.67
CDH4P55283 CYCSP42-201ENST00000450823 238 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC012671.1-201ENST00000451912 203 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AL445433.1-201ENST00000457507 257 ntBASIC4.63□□□□□ -1.67
CDH4P55283 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH4P55283 AC015795.1-201ENST00000513669 327 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH4P55283 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
CDH4P55283 DYNLL1P4-201ENST00000549314 266 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC005191.1-201ENST00000603950 358 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC131238.1-201ENST00000617135 328 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC015871.5-202ENST00000623252 701 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC006065.6-201ENST00000625201 545 ntBASIC4.63□□□□□ -1.67
CDH4P55283 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH4P55283 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH4P55283 AL596275.2-204ENST00000641628 552 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AL596275.2-206ENST00000641957 626 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC015813.6-201ENST00000624409 5808 ntBASIC4.63□□□□□ -1.67
CDH4P55283 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH4P55283 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH4P55283 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH4P55283 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDH4P55283 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH4P55283 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH4P55283 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH4P55283 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH4P55283 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH4P55283 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH4P55283 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 UBBP2-201ENST00000376781 231 ntBASIC4.62□□□□□ -1.67
CDH4P55283 MIR1271-201ENST00000408537 86 ntBASIC4.62□□□□□ -1.67
CDH4P55283 AC073136.2-201ENST00000417282 849 ntBASIC4.62□□□□□ -1.67
CDH4P55283 AL590609.2-201ENST00000421430 368 ntBASIC4.62□□□□□ -1.67
CDH4P55283 AL356387.2-201ENST00000422272 243 ntBASIC4.62□□□□□ -1.67
CDH4P55283 AC012519.1-201ENST00000424588 610 ntBASIC4.62□□□□□ -1.67
CDH4P55283 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 FHP1-201ENST00000442741 703 ntBASIC4.62□□□□□ -1.67
CDH4P55283 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.62□□□□□ -1.67
CDH4P55283 RPL21P126-201ENST00000470049 478 ntBASIC4.62□□□□□ -1.67
CDH4P55283 RPL23AP37-201ENST00000479658 549 ntBASIC4.62□□□□□ -1.67
CDH4P55283 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 RAB9BP1-201ENST00000519581 626 ntBASIC4.62□□□□□ -1.67
CDH4P55283 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH4P55283 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH4P55283 AL035461.2-201ENST00000619201 524 ntBASIC4.62□□□□□ -1.67
CDH4P55283 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH4P55283 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH4P55283 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH4P55283 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms