Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MIR1179-201ENST00000408703 91 ntBASIC6.02□□□□□ -1.45
CLTCL1P53675 HSPE1P12-201ENST00000412576 301 ntBASIC6.02□□□□□ -1.45
CLTCL1P53675 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.02□□□□□ -1.45
CLTCL1P53675 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.02□□□□□ -1.45
CLTCL1P53675 AC006011.1-201ENST00000442758 349 ntBASIC6.02□□□□□ -1.45
CLTCL1P53675 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.02□□□□□ -1.45
CLTCL1P53675 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.02□□□□□ -1.45
CLTCL1P53675 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.02□□□□□ -1.45
CLTCL1P53675 AC010487.1-201ENST00000594408 1172 ntBASIC6.02□□□□□ -1.45
CLTCL1P53675 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.02□□□□□ -1.45
CLTCL1P53675 AL356863.1-201ENST00000623378 1080 ntBASIC6.02□□□□□ -1.45
CLTCL1P53675 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.02□□□□□ -1.45
CLTCL1P53675 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLTCL1P53675 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.02□□□□□ -1.45
CLTCL1P53675 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLTCL1P53675 USP9YP4-201ENST00000424401 1745 ntBASIC6.01□□□□□ -1.45
CLTCL1P53675 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
CLTCL1P53675 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.01□□□□□ -1.45
CLTCL1P53675 SNORD66.1-201ENST00000391230 76 ntBASIC6.01□□□□□ -1.45
CLTCL1P53675 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.01□□□□□ -1.45
CLTCL1P53675 OR8F1P-201ENST00000425243 930 ntBASIC6.01□□□□□ -1.45
CLTCL1P53675 OR5BE1P-201ENST00000425977 939 ntBASIC6.01□□□□□ -1.45
CLTCL1P53675 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.01□□□□□ -1.45
CLTCL1P53675 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.01□□□□□ -1.45
CLTCL1P53675 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.01□□□□□ -1.45
CLTCL1P53675 RPS11P1-201ENST00000451072 473 ntBASIC6.01□□□□□ -1.45
CLTCL1P53675 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.01□□□□□ -1.45
CLTCL1P53675 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.01□□□□□ -1.45
CLTCL1P53675 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLTCL1P53675 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.01□□□□□ -1.45
CLTCL1P53675 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.01□□□□□ -1.45
CLTCL1P53675 OR5BE1P-202ENST00000641168 1176 ntBASIC6.01□□□□□ -1.45
CLTCL1P53675 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CLTCL1P53675 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.01□□□□□ -1.45
CLTCL1P53675 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 RN7SKP74-201ENST00000362849 309 ntBASIC6□□□□□ -1.45
CLTCL1P53675 EIF1P3-201ENST00000423841 334 ntBASIC6□□□□□ -1.45
CLTCL1P53675 AC006946.1-201ENST00000429106 328 ntBASIC6□□□□□ -1.45
CLTCL1P53675 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6□□□□□ -1.45
CLTCL1P53675 AL133372.1-201ENST00000493565 745 ntBASIC6□□□□□ -1.45
CLTCL1P53675 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6□□□□□ -1.45
CLTCL1P53675 AC023632.4-201ENST00000517783 191 ntBASIC6□□□□□ -1.45
CLTCL1P53675 AL513548.1-201ENST00000562904 1724 ntBASIC6□□□□□ -1.45
CLTCL1P53675 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6□□□□□ -1.45
CLTCL1P53675 OR51C1P-201ENST00000608504 942 ntBASIC6□□□□□ -1.45
CLTCL1P53675 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6□□□□□ -1.45
CLTCL1P53675 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
CLTCL1P53675 MAPK10-286ENST00000641208 8747 ntBASIC6□□□□□ -1.45
CLTCL1P53675 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLTCL1P53675 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLTCL1P53675 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6□□□□□ -1.45
CLTCL1P53675 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLTCL1P53675 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLTCL1P53675 MIR208A-201ENST00000362287 71 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 AL450992.3-201ENST00000413192 568 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.99□□□□□ -1.45
CLTCL1P53675 RNA5SP103-201ENST00000459503 118 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 BNIP3P41-201ENST00000503774 571 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.99□□□□□ -1.45
CLTCL1P53675 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.99□□□□□ -1.45
CLTCL1P53675 CYCSP28-201ENST00000534284 321 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 YPEL5P3-201ENST00000547227 352 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.99□□□□□ -1.45
CLTCL1P53675 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 AC005005.4-201ENST00000623789 16698 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.99□□□□□ -1.45
CLTCL1P53675 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLTCL1P53675 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.99□□□□□ -1.45
CLTCL1P53675 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLTCL1P53675 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLTCL1P53675 RNA5SP22-201ENST00000365393 109 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 RPL23AP25-201ENST00000430973 463 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 PTMAP3-201ENST00000447474 330 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 AL133547.1-201ENST00000448546 220 ntBASIC5.99□□□□□ -1.45
CLTCL1P53675 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.99□□□□□ -1.45
CLTCL1P53675 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.99□□□□□ -1.45
CLTCL1P53675 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.99□□□□□ -1.45
CLTCL1P53675 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.99□□□□□ -1.45
CLTCL1P53675 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLTCL1P53675 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
CLTCL1P53675 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLTCL1P53675 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.98□□□□□ -1.45
CLTCL1P53675 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CLTCL1P53675 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
CLTCL1P53675 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLTCL1P53675 ERCC6-202ENST00000374127 1782 ntBASIC5.98□□□□□ -1.45
CLTCL1P53675 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLTCL1P53675 AL358472.1-201ENST00000431295 329 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms