Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 uc_338.13-201ENST00000618243 179 ntBASIC5.15□□□□□ -1.59
NEDD4P46934 MIR7154-201ENST00000620673 73 ntBASIC5.15□□□□□ -1.59
NEDD4P46934 AC140479.6-201ENST00000633535 357 ntBASIC5.15□□□□□ -1.59
NEDD4P46934 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD4P46934 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD4P46934 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD4P46934 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD4P46934 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.14□□□□□ -1.59
NEDD4P46934 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.14□□□□□ -1.59
NEDD4P46934 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 AL078604.1-201ENST00000404609 466 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 AC096644.3-201ENST00000416788 338 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 MFSD13B-201ENST00000420133 1290 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 SKP1P3-201ENST00000429280 487 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.14□□□□□ -1.59
NEDD4P46934 RPL7P32-201ENST00000457119 744 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.14□□□□□ -1.59
NEDD4P46934 RN7SL481P-201ENST00000477764 299 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 AC041039.1-201ENST00000485656 536 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 AC026979.1-201ENST00000492525 396 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 AC108022.1-201ENST00000493466 478 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 RN7SL691P-201ENST00000494487 301 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.14□□□□□ -1.59
NEDD4P46934 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.14□□□□□ -1.59
NEDD4P46934 AC100770.1-201ENST00000532310 322 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.14□□□□□ -1.59
NEDD4P46934 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.14□□□□□ -1.59
NEDD4P46934 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.14□□□□□ -1.59
NEDD4P46934 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.14□□□□□ -1.59
NEDD4P46934 AC023509.5-201ENST00000617434 807 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 AC010435.1-201ENST00000623353 1177 ntBASIC5.14□□□□□ -1.59
NEDD4P46934 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD4P46934 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NEDD4P46934 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.13□□□□□ -1.59
NEDD4P46934 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 MAPK10-303ENST00000641324 3959 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 OR4K17-201ENST00000315543 1032 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 AL139039.2-201ENST00000407436 479 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.13□□□□□ -1.59
NEDD4P46934 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.13□□□□□ -1.59
NEDD4P46934 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NEDD4P46934 VN1R32P-201ENST00000452234 905 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.13□□□□□ -1.59
NEDD4P46934 AC104849.1-201ENST00000462623 405 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.13□□□□□ -1.59
NEDD4P46934 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.13□□□□□ -1.59
NEDD4P46934 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.13□□□□□ -1.59
NEDD4P46934 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.13□□□□□ -1.59
NEDD4P46934 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.13□□□□□ -1.59
NEDD4P46934 AC090515.3-201ENST00000560431 315 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 AC009268.1-201ENST00000561352 1203 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 MIR4284-201ENST00000578924 81 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 KPNA2P3-201ENST00000584190 848 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 AP000843.1-201ENST00000624880 701 ntBASIC5.13□□□□□ -1.59
NEDD4P46934 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEDD4P46934 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.12□□□□□ -1.59
NEDD4P46934 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.12□□□□□ -1.59
NEDD4P46934 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
NEDD4P46934 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.12□□□□□ -1.59
NEDD4P46934 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NEDD4P46934 AL592182.3-201ENST00000642132 3304 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NEDD4P46934 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.12□□□□□ -1.59
NEDD4P46934 RPL32P3-201ENST00000359025 275 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 RNU1-132P-201ENST00000364300 164 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 HDGFP1-201ENST00000405943 252 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 SNORA11F-201ENST00000408237 128 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 CEACAMP8-201ENST00000413902 580 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 Z85994.2-201ENST00000434327 452 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 RPL7P22-201ENST00000466005 733 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AC022795.1-201ENST00000473808 480 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 AC093840.1-201ENST00000511599 336 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 MTND2P7-201ENST00000521337 640 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
NEDD4P46934 AL352979.3-201ENST00000553515 247 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms