Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MARK2P15-201ENST00000432204 2186 ntBASIC4.85□□□□□ -1.63
CASQ1P31415 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CASQ1P31415 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CASQ1P31415 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASQ1P31415 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.84□□□□□ -1.63
CASQ1P31415 NCLP2-201ENST00000416078 1462 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 U3.15-201ENST00000365398 212 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CASQ1P31415 AP002530.1-201ENST00000405705 684 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.84□□□□□ -1.63
CASQ1P31415 RPS23P10-201ENST00000416185 486 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 RPL7P53-201ENST00000421245 739 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC245047.2-201ENST00000441060 530 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.84□□□□□ -1.63
CASQ1P31415 YRDCP3-201ENST00000456507 480 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.84□□□□□ -1.63
CASQ1P31415 AL592156.1-201ENST00000508758 304 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 PARP4P3-201ENST00000510265 317 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 FTH1P9-201ENST00000513251 355 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 OR5M7P-201ENST00000526140 972 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.84□□□□□ -1.63
CASQ1P31415 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.84□□□□□ -1.63
CASQ1P31415 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CASQ1P31415 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CASQ1P31415 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CASQ1P31415 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC009779.8-202ENST00000607990 932 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 MIR6780B-201ENST00000610307 79 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 AC079395.2-201ENST00000610982 737 ntBASIC4.84□□□□□ -1.63
CASQ1P31415 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.84□□□□□ -1.63
CASQ1P31415 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CASQ1P31415 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASQ1P31415 Y_RNA.62-201ENST00000362840 99 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASQ1P31415 RN7SKP222-201ENST00000410651 315 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 GJA6P-201ENST00000415117 1042 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC009965.2-201ENST00000425328 970 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 SPRYD7P1-201ENST00000443861 570 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 DDX39BP2-208ENST00000453923 258 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 RN7SL168P-201ENST00000463821 279 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC108693.1-201ENST00000496068 432 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.83□□□□□ -1.64
CASQ1P31415 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.83□□□□□ -1.64
CASQ1P31415 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC084373.1-201ENST00000603311 235 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 AC126175.1-201ENST00000617041 758 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.83□□□□□ -1.64
CASQ1P31415 AL359742.1-201ENST00000622497 540 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CASQ1P31415 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CASQ1P31415 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC139769.1-204ENST00000472297 1931 ntBASIC4.83□□□□□ -1.64
CASQ1P31415 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.83□□□□□ -1.64
CASQ1P31415 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASQ1P31415 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CASQ1P31415 AC100871.1-201ENST00000507871 1456 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CASQ1P31415 AC007685.1-201ENST00000329806 452 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CASQ1P31415 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.82□□□□□ -1.64
CASQ1P31415 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 VN1R3-201ENST00000418822 919 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.82□□□□□ -1.64
CASQ1P31415 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
CASQ1P31415 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.82□□□□□ -1.64
CASQ1P31415 NPM1P24-201ENST00000428039 894 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 BTG3P1-201ENST00000435859 716 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 PSMD10P3-201ENST00000437000 448 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 ELOCP8-201ENST00000439309 332 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 ELOCP15-201ENST00000442090 332 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.82□□□□□ -1.64
CASQ1P31415 AC010733.1-201ENST00000451515 401 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 RPL5P32-201ENST00000454085 879 ntBASIC4.82□□□□□ -1.64
CASQ1P31415 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.82□□□□□ -1.64
CASQ1P31415 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.82□□□□□ -1.64
CASQ1P31415 MORF4L1P3-201ENST00000525966 950 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms