Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.22□□□□□ -1.41
CNGA1P29973 AC093775.1-201ENST00000624154 1868 ntBASIC6.22□□□□□ -1.41
CNGA1P29973 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CNGA1P29973 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CNGA1P29973 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.21□□□□□ -1.41
CNGA1P29973 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CNGA1P29973 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.21□□□□□ -1.41
CNGA1P29973 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
CNGA1P29973 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CNGA1P29973 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CNGA1P29973 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.21□□□□□ -1.42
CNGA1P29973 snoZ40.1-201ENST00000364540 72 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 RNU6-707P-201ENST00000364647 95 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 RNU6-304P-201ENST00000364855 107 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 OR52E6-202ENST00000379946 954 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 MIR16-1-201ENST00000385271 89 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CNGA1P29973 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.21□□□□□ -1.42
CNGA1P29973 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.21□□□□□ -1.42
CNGA1P29973 DYNLL1P7-201ENST00000429273 258 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.21□□□□□ -1.42
CNGA1P29973 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 TXNP5-201ENST00000441043 315 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 MTCYBP11-201ENST00000447254 1109 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 USP9YP25-201ENST00000457708 443 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 snoU13.20-201ENST00000459180 104 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.21□□□□□ -1.42
CNGA1P29973 AC034244.1-201ENST00000507687 207 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AC118282.2-201ENST00000508739 374 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 ST13P12-201ENST00000508958 1094 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AC005351.1-201ENST00000511152 786 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.21□□□□□ -1.42
CNGA1P29973 AC092747.2-201ENST00000545069 983 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.21□□□□□ -1.42
CNGA1P29973 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.21□□□□□ -1.42
CNGA1P29973 RPL10P14-201ENST00000565265 298 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AC145350.1-201ENST00000567426 208 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 MIR3934-201ENST00000579806 107 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AC010487.1-201ENST00000594408 1172 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 NTAN1P1-201ENST00000603150 646 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AC109583.2-201ENST00000617367 129 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AC018926.3-201ENST00000618841 406 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 AP002967.1-201ENST00000624203 539 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CNGA1P29973 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.21□□□□□ -1.42
CNGA1P29973 CASC19-206ENST00000641028 1430 ntBASIC6.21□□□□□ -1.42
CNGA1P29973 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CNGA1P29973 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNGA1P29973 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AP001284.1-201ENST00000528393 2118 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 SGO1P1-201ENST00000603525 1447 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 RNU6-249P-201ENST00000363016 102 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 SNORD116.1-201ENST00000365628 92 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.2□□□□□ -1.42
CNGA1P29973 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 AL049745.1-201ENST00000433953 286 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 GSTM5P1-201ENST00000434751 660 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 UBE2V1P5-201ENST00000440070 405 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 NPM1P39-201ENST00000449818 867 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 RHEBP2-201ENST00000450289 600 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 RNU6-1218P-201ENST00000458990 108 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 AC006463.2-201ENST00000473326 348 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 RPL7P6-201ENST00000480903 738 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 GAPDHP39-201ENST00000481866 979 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC091951.3-201ENST00000504093 246 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 IGBP1P5-201ENST00000507524 1000 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC008562.1-201ENST00000521763 330 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 COX6B1P6-201ENST00000522347 255 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC138832.1-201ENST00000522871 556 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC137627.1-201ENST00000545761 289 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms