Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AC015871.3-201ENST00000618835 2261 ntBASIC8.15□□□□□ -1.1
PTPREP23469 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
PTPREP23469 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PTPREP23469 AC020978.6-201ENST00000571197 3177 ntBASIC8.15□□□□□ -1.11
PTPREP23469 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.15□□□□□ -1.11
PTPREP23469 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTPREP23469 AL049641.1-201ENST00000441055 1948 ntBASIC8.15□□□□□ -1.11
PTPREP23469 AC034111.1-201ENST00000562143 3770 ntBASIC8.15□□□□□ -1.11
PTPREP23469 DBF4P1-201ENST00000412976 1892 ntBASIC8.15□□□□□ -1.11
PTPREP23469 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.15□□□□□ -1.11
PTPREP23469 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
PTPREP23469 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
PTPREP23469 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTPREP23469 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PTPREP23469 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
PTPREP23469 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PTPREP23469 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPREP23469 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
PTPREP23469 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 OR11H5P-202ENST00000641612 1325 ntBASIC8.14□□□□□ -1.11
PTPREP23469 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 RNU5E-1-201ENST00000362477 120 ntBASIC8.14□□□□□ -1.11
PTPREP23469 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 Y_RNA.447-201ENST00000384184 113 ntBASIC8.14□□□□□ -1.11
PTPREP23469 MIR199B-201ENST00000384849 110 ntBASIC8.14□□□□□ -1.11
PTPREP23469 MIR548I2-201ENST00000408348 149 ntBASIC8.14□□□□□ -1.11
PTPREP23469 RNU4-26P-201ENST00000410270 107 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPREP23469 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 HMGB1P12-201ENST00000438594 598 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 AL390728.3-201ENST00000452704 270 ntBASIC8.14□□□□□ -1.11
PTPREP23469 RN7SL492P-201ENST00000460700 295 ntBASIC8.14□□□□□ -1.11
PTPREP23469 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 RPL7P22-201ENST00000466005 733 ntBASIC8.14□□□□□ -1.11
PTPREP23469 RN7SL797P-201ENST00000486314 297 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AC015911.1-201ENST00000495111 156 ntBASIC8.14□□□□□ -1.11
PTPREP23469 PGAM4P2-201ENST00000512491 721 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 OR52H2P-201ENST00000514607 902 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 AC109635.4-202ENST00000531666 412 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 MIR3157-201ENST00000578688 85 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.14□□□□□ -1.11
PTPREP23469 AC068802.1-201ENST00000603420 732 ntBASIC8.14□□□□□ -1.11
PTPREP23469 RPS4XP21-201ENST00000603814 750 ntBASIC8.14□□□□□ -1.11
PTPREP23469 AL359091.2-201ENST00000609303 556 ntBASIC8.14□□□□□ -1.11
PTPREP23469 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPREP23469 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
PTPREP23469 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PTPREP23469 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
PTPREP23469 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPREP23469 AL157831.2-201ENST00000564681 3095 ntBASIC8.14□□□□□ -1.11
PTPREP23469 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 AL359263.1-201ENST00000441188 2796 ntBASIC8.13□□□□□ -1.11
PTPREP23469 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPREP23469 ASNSP3-201ENST00000451989 1306 ntBASIC8.13□□□□□ -1.11
PTPREP23469 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.13□□□□□ -1.11
PTPREP23469 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PTPREP23469 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPREP23469 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 Y_RNA.364-201ENST00000365532 101 ntBASIC8.13□□□□□ -1.11
PTPREP23469 SNORD116-23-201ENST00000384645 92 ntBASIC8.13□□□□□ -1.11
PTPREP23469 MIR548K-201ENST00000408406 116 ntBASIC8.13□□□□□ -1.11
PTPREP23469 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPREP23469 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPREP23469 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPREP23469 AC099670.1-201ENST00000455141 783 ntBASIC8.13□□□□□ -1.11
PTPREP23469 SNORA81.1-201ENST00000458922 177 ntBASIC8.13□□□□□ -1.11
PTPREP23469 AC128713.1-201ENST00000471495 306 ntBASIC8.13□□□□□ -1.11
PTPREP23469 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC8.13□□□□□ -1.11
PTPREP23469 FAM206BP-201ENST00000510179 541 ntBASIC8.13□□□□□ -1.11
PTPREP23469 Y_RNA.665-201ENST00000516177 98 ntBASIC8.13□□□□□ -1.11
PTPREP23469 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPREP23469 NARSP2-201ENST00000518524 679 ntBASIC8.13□□□□□ -1.11
PTPREP23469 AC084337.1-201ENST00000524809 686 ntBASIC8.13□□□□□ -1.11
PTPREP23469 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms