Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ERCC2P18074 AL445487.1-201ENST00000415694 1580 ntBASIC4.9□□□□□ -1.63
ERCC2P18074 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.63
ERCC2P18074 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ERCC2P18074 AL442639.1-201ENST00000625030 1899 ntBASIC4.9□□□□□ -1.63
ERCC2P18074 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ERCC2P18074 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 DHX9P1-201ENST00000436565 3076 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 IGKV7-3-201ENST00000357453 298 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 SNORA58B-201ENST00000364259 136 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 SNORA40.4-201ENST00000390971 128 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 AL590762.2-201ENST00000395798 571 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 AL592291.1-201ENST00000403830 352 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 OR6C64P-201ENST00000419708 825 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 RPL36AP10-201ENST00000421785 322 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 RPL7P57-201ENST00000423238 740 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 EIF2S2P3-201ENST00000428356 999 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC2P18074 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC092013.1-201ENST00000438795 332 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC097499.1-201ENST00000444277 208 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 OTX2P1-201ENST00000450956 354 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.89□□□□□ -1.63
ERCC2P18074 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 MIR3667-201ENST00000581025 74 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 ZNF92P3-201ENST00000596594 954 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 AC018618.2-201ENST00000604770 446 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 AC116447.1-201ENST00000613153 453 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
ERCC2P18074 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC2P18074 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 PCAT14-202ENST00000627127 3935 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC2P18074 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC096656.1-201ENST00000623826 1364 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 LINC01355-201ENST00000566551 5444 ntBASIC4.89□□□□□ -1.63
ERCC2P18074 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
ERCC2P18074 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 AC090017.1-201ENST00000548612 1779 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 MTND5P11-201ENST00000511037 1812 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ERCC2P18074 SALL4P2-201ENST00000423288 2910 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ERCC2P18074 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC2P18074 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC2P18074 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
ERCC2P18074 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ERCC2P18074 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC2P18074 RNU4-44P-201ENST00000363050 141 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 RNU6-1005P-201ENST00000384519 107 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 RNU6-178P-201ENST00000384631 104 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 RNU6-796P-201ENST00000391086 107 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 SNORA68.2-201ENST00000391263 128 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 AP000580.1-201ENST00000404439 358 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 RNU6-603P-201ENST00000411403 107 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 OR51B3P-201ENST00000412287 913 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC2P18074 MTND4P11-201ENST00000417020 1058 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC2P18074 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC2P18074 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC2P18074 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC2P18074 AC008072.1-201ENST00000434254 824 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC2P18074 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC2P18074 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC2P18074 AC079168.2-201ENST00000453977 416 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 AC091685.2-201ENST00000454924 864 ntBASIC4.88□□□□□ -1.63
ERCC2P18074 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms