Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.8□□□□□ -1.64
COL11A1P12107 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
COL11A1P12107 AL513548.1-201ENST00000562904 1724 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 AL356968.2-201ENST00000412769 1257 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL11A1P12107 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.8□□□□□ -1.64
COL11A1P12107 RPS29P19-201ENST00000479709 171 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 VN1R105P-201ENST00000486595 910 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.8□□□□□ -1.64
COL11A1P12107 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.8□□□□□ -1.64
COL11A1P12107 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.8□□□□□ -1.64
COL11A1P12107 AP005901.4-201ENST00000577336 569 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.8□□□□□ -1.64
COL11A1P12107 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.8□□□□□ -1.64
COL11A1P12107 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL11A1P12107 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
COL11A1P12107 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL11A1P12107 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL11A1P12107 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
COL11A1P12107 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL11A1P12107 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
COL11A1P12107 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
COL11A1P12107 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.79□□□□□ -1.64
COL11A1P12107 PRELID3BP10-201ENST00000431957 584 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 AC006011.1-201ENST00000442758 349 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.79□□□□□ -1.64
COL11A1P12107 PARP4P3-201ENST00000510265 317 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 RNU6-352P-201ENST00000516908 107 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 OR5M7P-201ENST00000526140 972 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.79□□□□□ -1.64
COL11A1P12107 MIR4444-1-201ENST00000581696 74 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 MIR3158-1-201ENST00000583596 81 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 MIR4444-2-201ENST00000584390 74 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL11A1P12107 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.79□□□□□ -1.64
COL11A1P12107 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL11A1P12107 AL031595.2-201ENST00000624215 19071 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL11A1P12107 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL11A1P12107 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
COL11A1P12107 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
COL11A1P12107 RNU11-4P-201ENST00000391149 133 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.79□□□□□ -1.64
COL11A1P12107 RPL38P1-201ENST00000460914 211 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 RPL23AP2-201ENST00000471227 466 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.79□□□□□ -1.64
COL11A1P12107 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.79□□□□□ -1.64
COL11A1P12107 AC008739.3-201ENST00000603262 127 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.79□□□□□ -1.64
COL11A1P12107 MIR6500-201ENST00000622700 86 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 AL356863.1-201ENST00000623378 1080 ntBASIC4.79□□□□□ -1.64
COL11A1P12107 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.78□□□□□ -1.64
COL11A1P12107 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.78□□□□□ -1.64
COL11A1P12107 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.78□□□□□ -1.64
COL11A1P12107 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
COL11A1P12107 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL11A1P12107 RNA5SP22-201ENST00000365393 109 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
COL11A1P12107 RNU6ATAC-201ENST00000408749 126 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.78□□□□□ -1.64
COL11A1P12107 EIF1P3-201ENST00000423841 334 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 HMGB3P5-201ENST00000428894 612 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.78□□□□□ -1.64
COL11A1P12107 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.78□□□□□ -1.64
COL11A1P12107 RNU6-513P-201ENST00000516104 104 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 AC023632.4-201ENST00000517783 191 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 TRMT10BP1-201ENST00000519377 943 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 AC068993.1-201ENST00000546724 589 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 CCNG2P1-201ENST00000549521 1000 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 AC053481.3-201ENST00000577881 843 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 AC010608.2-201ENST00000624830 470 ntBASIC4.78□□□□□ -1.64
COL11A1P12107 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL11A1P12107 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
COL11A1P12107 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL11A1P12107 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.77□□□□□ -1.65
COL11A1P12107 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL11A1P12107 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL11A1P12107 RNA5SP387-201ENST00000364226 106 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 AL359643.1-201ENST00000404109 423 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.77□□□□□ -1.65
COL11A1P12107 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.77□□□□□ -1.65
COL11A1P12107 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.77□□□□□ -1.65
COL11A1P12107 AL161756.2-201ENST00000604597 246 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.77□□□□□ -1.65
COL11A1P12107 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.77□□□□□ -1.65
COL11A1P12107 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms