Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.58□□□□□ -1.84
CD28P10747 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CD28P10747 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CD28P10747 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 AC083843.3-201ENST00000623679 2186 ntBASIC3.58□□□□□ -1.84
CD28P10747 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.57□□□□□ -1.84
CD28P10747 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 RNU6-670P-201ENST00000364312 104 ntBASIC3.57□□□□□ -1.84
CD28P10747 RN7SKP227-201ENST00000364445 330 ntBASIC3.57□□□□□ -1.84
CD28P10747 RNA5SP479-201ENST00000364858 117 ntBASIC3.57□□□□□ -1.84
CD28P10747 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 RNA5SP105-201ENST00000391123 113 ntBASIC3.57□□□□□ -1.84
CD28P10747 AC104297.1-201ENST00000393779 870 ntBASIC3.57□□□□□ -1.84
CD28P10747 ARL4AP5-201ENST00000404372 599 ntBASIC3.57□□□□□ -1.84
CD28P10747 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 AL445487.1-201ENST00000415694 1580 ntBASIC3.57□□□□□ -1.84
CD28P10747 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 OR51A6P-201ENST00000418680 1004 ntBASIC3.57□□□□□ -1.84
CD28P10747 VN1R37P-201ENST00000419096 748 ntBASIC3.57□□□□□ -1.84
CD28P10747 AL356387.2-201ENST00000422272 243 ntBASIC3.57□□□□□ -1.84
CD28P10747 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.57□□□□□ -1.84
CD28P10747 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.57□□□□□ -1.84
CD28P10747 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.57□□□□□ -1.84
CD28P10747 AL392003.1-201ENST00000434394 243 ntBASIC3.57□□□□□ -1.84
CD28P10747 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.57□□□□□ -1.84
CD28P10747 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.57□□□□□ -1.84
CD28P10747 SCARNA10-201ENST00000459255 330 ntBASIC3.57□□□□□ -1.84
CD28P10747 AC090686.1-201ENST00000481577 749 ntBASIC3.57□□□□□ -1.84
CD28P10747 NIP7P2-201ENST00000485801 544 ntBASIC3.57□□□□□ -1.84
CD28P10747 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 AC091917.2-201ENST00000505002 744 ntBASIC3.57□□□□□ -1.84
CD28P10747 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
CD28P10747 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.57□□□□□ -1.84
CD28P10747 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.57□□□□□ -1.84
CD28P10747 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 AC087190.4-201ENST00000574616 8334 ntBASIC3.57□□□□□ -1.84
CD28P10747 CYCSP40-201ENST00000575927 294 ntBASIC3.57□□□□□ -1.84
CD28P10747 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.57□□□□□ -1.84
CD28P10747 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CD28P10747 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 AC020910.2-201ENST00000603635 610 ntBASIC3.57□□□□□ -1.84
CD28P10747 ARF4P1-201ENST00000605447 541 ntBASIC3.57□□□□□ -1.84
CD28P10747 AC090948.1-201ENST00000607464 549 ntBASIC3.57□□□□□ -1.84
CD28P10747 AC091979.2-201ENST00000607514 214 ntBASIC3.57□□□□□ -1.84
CD28P10747 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.57□□□□□ -1.84
CD28P10747 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.57□□□□□ -1.84
CD28P10747 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CD28P10747 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD28P10747 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD28P10747 AL391684.1-202ENST00000641293 1636 ntBASIC3.56□□□□□ -1.84
CD28P10747 AL672167.1-205ENST00000641112 3080 ntBASIC3.56□□□□□ -1.84
CD28P10747 MAPK10-303ENST00000641324 3959 ntBASIC3.56□□□□□ -1.84
CD28P10747 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.56□□□□□ -1.84
CD28P10747 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD28P10747 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD28P10747 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD28P10747 RPL23AP59-201ENST00000399415 461 ntBASIC3.56□□□□□ -1.84
CD28P10747 AP000580.1-201ENST00000404439 358 ntBASIC3.56□□□□□ -1.84
CD28P10747 TRIM60P17-201ENST00000415181 719 ntBASIC3.56□□□□□ -1.84
CD28P10747 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.56□□□□□ -1.84
CD28P10747 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.56□□□□□ -1.84
CD28P10747 AC012519.1-201ENST00000424588 610 ntBASIC3.56□□□□□ -1.84
CD28P10747 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.56□□□□□ -1.84
CD28P10747 AC004975.1-201ENST00000428733 208 ntBASIC3.56□□□□□ -1.84
CD28P10747 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.56□□□□□ -1.84
CD28P10747 AC011998.1-201ENST00000433403 117 ntBASIC3.56□□□□□ -1.84
CD28P10747 AC092447.2-201ENST00000435487 669 ntBASIC3.56□□□□□ -1.84
CD28P10747 TMX2P1-201ENST00000436507 708 ntBASIC3.56□□□□□ -1.84
CD28P10747 NPM1P39-201ENST00000449818 867 ntBASIC3.56□□□□□ -1.84
CD28P10747 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.56□□□□□ -1.84
CD28P10747 BTG4P1-201ENST00000510421 183 ntBASIC3.56□□□□□ -1.84
CD28P10747 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.56□□□□□ -1.84
CD28P10747 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.56□□□□□ -1.84
CD28P10747 AC117525.1-201ENST00000515228 503 ntBASIC3.56□□□□□ -1.84
CD28P10747 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.56□□□□□ -1.84
CD28P10747 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.56□□□□□ -1.84
CD28P10747 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.56□□□□□ -1.84
CD28P10747 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.56□□□□□ -1.84
CD28P10747 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.56□□□□□ -1.84
CD28P10747 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms