Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR6085-201ENST00000618314 110 ntBASIC6.71□□□□□ -1.34
RARAP10276 AC116563.2-201ENST00000624751 535 ntBASIC6.71□□□□□ -1.34
RARAP10276 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.71□□□□□ -1.34
RARAP10276 AC110994.2-201ENST00000635481 492 ntBASIC6.71□□□□□ -1.34
RARAP10276 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
RARAP10276 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.71□□□□□ -1.34
RARAP10276 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 AC010168.2-201ENST00000562691 5428 ntBASIC6.71□□□□□ -1.34
RARAP10276 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 OFD1P17-201ENST00000437639 3018 ntBASIC6.71□□□□□ -1.34
RARAP10276 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.71□□□□□ -1.34
RARAP10276 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RARAP10276 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RARAP10276 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.71□□□□□ -1.34
RARAP10276 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
RARAP10276 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.7□□□□□ -1.34
RARAP10276 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 Y_RNA.86-201ENST00000363020 111 ntBASIC6.7□□□□□ -1.34
RARAP10276 RNU6-492P-201ENST00000363035 104 ntBASIC6.7□□□□□ -1.34
RARAP10276 RNU6-216P-201ENST00000363282 104 ntBASIC6.7□□□□□ -1.34
RARAP10276 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 Y_RNA.394-201ENST00000383942 103 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC245036.1-201ENST00000391727 309 ntBASIC6.7□□□□□ -1.34
RARAP10276 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 MRPS21P5-201ENST00000417885 231 ntBASIC6.7□□□□□ -1.34
RARAP10276 RPS17P17-201ENST00000419392 409 ntBASIC6.7□□□□□ -1.34
RARAP10276 CYP4F30P-202ENST00000420048 405 ntBASIC6.7□□□□□ -1.34
RARAP10276 USP9YP36-201ENST00000424581 829 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 FCF1P1-201ENST00000432690 571 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC002486.1-201ENST00000435098 391 ntBASIC6.7□□□□□ -1.34
RARAP10276 MRPS21P3-201ENST00000436696 262 ntBASIC6.7□□□□□ -1.34
RARAP10276 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 AC079448.1-201ENST00000449377 373 ntBASIC6.7□□□□□ -1.34
RARAP10276 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 RPL26P28-201ENST00000451325 435 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.7□□□□□ -1.34
RARAP10276 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 RPL31P11-202ENST00000454082 372 ntBASIC6.7□□□□□ -1.34
RARAP10276 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 AC128716.1-201ENST00000475129 166 ntBASIC6.7□□□□□ -1.34
RARAP10276 RPS4XP17-201ENST00000479057 754 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC090638.1-201ENST00000498296 909 ntBASIC6.7□□□□□ -1.34
RARAP10276 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.7□□□□□ -1.34
RARAP10276 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.7□□□□□ -1.34
RARAP10276 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 MTND5P4-201ENST00000514978 288 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 HMGB1P23-201ENST00000518743 568 ntBASIC6.7□□□□□ -1.34
RARAP10276 HPRT1P3-201ENST00000539521 576 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC093027.1-201ENST00000546698 429 ntBASIC6.7□□□□□ -1.34
RARAP10276 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.7□□□□□ -1.34
RARAP10276 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 RPL12P25-202ENST00000598100 674 ntBASIC6.7□□□□□ -1.34
RARAP10276 KC877982.1-201ENST00000602313 470 ntBASIC6.7□□□□□ -1.34
RARAP10276 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.7□□□□□ -1.34
RARAP10276 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.7□□□□□ -1.34
RARAP10276 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.7□□□□□ -1.34
RARAP10276 AL360085.1-201ENST00000604713 532 ntBASIC6.7□□□□□ -1.34
RARAP10276 AC018695.5-201ENST00000605872 315 ntBASIC6.7□□□□□ -1.34
RARAP10276 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.7□□□□□ -1.34
RARAP10276 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.7□□□□□ -1.34
RARAP10276 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RARAP10276 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.7□□□□□ -1.34
RARAP10276 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RARAP10276 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.69□□□□□ -1.34
RARAP10276 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RARAP10276 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RARAP10276 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
RARAP10276 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RARAP10276 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RARAP10276 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RARAP10276 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.69□□□□□ -1.34
RARAP10276 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RARAP10276 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RARAP10276 SNORD35A-201ENST00000363389 86 ntBASIC6.69□□□□□ -1.34
RARAP10276 RNA5SP514-201ENST00000363717 111 ntBASIC6.69□□□□□ -1.34
RARAP10276 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms