Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL2A1P02458 AC003985.2-201ENST00000562268 1669 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 VPS35P1-201ENST00000563400 1518 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.1□□□□□ -1.59
COL2A1P02458 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL2A1P02458 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 AL607077.1-201ENST00000401718 499 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.1□□□□□ -1.59
COL2A1P02458 RPL36AP10-201ENST00000421785 322 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.1□□□□□ -1.59
COL2A1P02458 ELOCP6-201ENST00000429066 328 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.1□□□□□ -1.59
COL2A1P02458 AL445433.1-201ENST00000457507 257 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 ELOCP12-201ENST00000458706 328 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.1□□□□□ -1.59
COL2A1P02458 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.1□□□□□ -1.59
COL2A1P02458 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.1□□□□□ -1.59
COL2A1P02458 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 AC105233.3-201ENST00000531125 744 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.1□□□□□ -1.59
COL2A1P02458 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL2A1P02458 RN7SL703P-201ENST00000578485 302 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 RN7SL435P-201ENST00000584418 282 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.1□□□□□ -1.59
COL2A1P02458 AC002069.2-201ENST00000603580 883 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AC008966.2-201ENST00000606157 453 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AC243756.2-201ENST00000618406 463 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AP000720.1-201ENST00000625091 483 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.1□□□□□ -1.59
COL2A1P02458 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.1□□□□□ -1.59
COL2A1P02458 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL2A1P02458 AC008079.2-201ENST00000623543 20396 ntBASIC5.1□□□□□ -1.59
COL2A1P02458 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.09□□□□□ -1.59
COL2A1P02458 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
COL2A1P02458 RNA5SP175-201ENST00000364275 119 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 RNA5SP372-201ENST00000390836 115 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 RPS3AP25-201ENST00000411660 793 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 VDAC1P9-201ENST00000412766 841 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 RPL6P29-201ENST00000414863 865 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 COX6B1P7-201ENST00000430845 235 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 MRPL50P1-201ENST00000431951 384 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 KATNBL1P2-201ENST00000433311 835 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 RPS26P2-201ENST00000440331 348 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 AC079804.1-201ENST00000461922 436 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 RPL23AP37-201ENST00000479658 549 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 AL132838.2-201ENST00000492041 314 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 OR5D2P-201ENST00000524390 911 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.09□□□□□ -1.59
COL2A1P02458 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.09□□□□□ -1.59
COL2A1P02458 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.09□□□□□ -1.59
COL2A1P02458 RN7SL339P-201ENST00000580597 296 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.09□□□□□ -1.59
COL2A1P02458 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.09□□□□□ -1.59
COL2A1P02458 MIR6867-201ENST00000610636 67 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 MIR7151-201ENST00000617477 60 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.09□□□□□ -1.59
COL2A1P02458 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.09□□□□□ -1.59
COL2A1P02458 AC008013.2-202ENST00000637965 364 ntBASIC5.09□□□□□ -1.59
COL2A1P02458 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.09□□□□□ -1.59
COL2A1P02458 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL2A1P02458 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
COL2A1P02458 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL2A1P02458 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL2A1P02458 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL2A1P02458 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.08□□□□□ -1.6
COL2A1P02458 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL2A1P02458 MIR372-201ENST00000362225 67 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 CTSL3P-202ENST00000412179 788 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 AC073310.1-201ENST00000423226 1033 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.08□□□□□ -1.6
COL2A1P02458 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.08□□□□□ -1.6
COL2A1P02458 RPL21P89-201ENST00000444021 467 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 RPL23AP81-201ENST00000455252 467 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.08□□□□□ -1.6
COL2A1P02458 EIF2S2P5-201ENST00000457635 968 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 snoU13.24-201ENST00000458998 104 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 TPT1P3-201ENST00000492841 512 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.08□□□□□ -1.6
COL2A1P02458 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.08□□□□□ -1.6
COL2A1P02458 HNRNPCP4-201ENST00000571636 900 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 AL160290.3-201ENST00000604869 165 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 AC091953.5-201ENST00000622919 233 ntBASIC5.08□□□□□ -1.6
COL2A1P02458 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL2A1P02458 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms