Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC115285.1-201ENST00000424879 736 ntBASIC7.54□□□□□ -1.2
CUX2O14529 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7.54□□□□□ -1.2
CUX2O14529 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.54□□□□□ -1.2
CUX2O14529 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUX2O14529 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.54□□□□□ -1.2
CUX2O14529 AC105031.1-201ENST00000518550 476 ntBASIC7.54□□□□□ -1.2
CUX2O14529 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.54□□□□□ -1.2
CUX2O14529 TVP23BP1-201ENST00000557500 617 ntBASIC7.54□□□□□ -1.2
CUX2O14529 AL137843.1-201ENST00000605078 385 ntBASIC7.54□□□□□ -1.2
CUX2O14529 AL034408.1-202ENST00000636088 415 ntBASIC7.54□□□□□ -1.2
CUX2O14529 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUX2O14529 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUX2O14529 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUX2O14529 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
CUX2O14529 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUX2O14529 UBBP2-201ENST00000376781 231 ntBASIC7.53□□□□□ -1.2
CUX2O14529 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.53□□□□□ -1.2
CUX2O14529 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.53□□□□□ -1.2
CUX2O14529 NANOGP10-201ENST00000453325 895 ntBASIC7.53□□□□□ -1.2
CUX2O14529 ISCUP1-201ENST00000454451 448 ntBASIC7.53□□□□□ -1.2
CUX2O14529 AL606490.9-201ENST00000603331 271 ntBASIC7.53□□□□□ -1.2
CUX2O14529 AC015914.2-201ENST00000618167 288 ntBASIC7.53□□□□□ -1.2
CUX2O14529 MIR6500-201ENST00000622700 86 ntBASIC7.53□□□□□ -1.2
CUX2O14529 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.53□□□□□ -1.2
CUX2O14529 LINC01808-202ENST00000641680 1116 ntBASIC7.53□□□□□ -1.2
CUX2O14529 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.53□□□□□ -1.2
CUX2O14529 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.53□□□□□ -1.2
CUX2O14529 AL391684.1-202ENST00000641293 1636 ntBASIC7.53□□□□□ -1.2
CUX2O14529 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUX2O14529 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.53□□□□□ -1.2
CUX2O14529 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.53□□□□□ -1.2
CUX2O14529 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC7.53□□□□□ -1.2
CUX2O14529 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.53□□□□□ -1.2
CUX2O14529 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CUX2O14529 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CUX2O14529 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
CUX2O14529 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUX2O14529 AL034370.1-201ENST00000397254 1590 ntBASIC7.52□□□□□ -1.21
CUX2O14529 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
CUX2O14529 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.52□□□□□ -1.21
CUX2O14529 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUX2O14529 PCNPP4-201ENST00000414817 517 ntBASIC7.52□□□□□ -1.21
CUX2O14529 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.52□□□□□ -1.21
CUX2O14529 PPIAP3-201ENST00000450588 505 ntBASIC7.52□□□□□ -1.21
CUX2O14529 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.52□□□□□ -1.21
CUX2O14529 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.52□□□□□ -1.21
CUX2O14529 AC010480.1-201ENST00000624823 684 ntBASIC7.52□□□□□ -1.21
CUX2O14529 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.52□□□□□ -1.21
CUX2O14529 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC7.52□□□□□ -1.21
CUX2O14529 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUX2O14529 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CUX2O14529 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUX2O14529 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC7.51□□□□□ -1.21
CUX2O14529 MFSD13B-201ENST00000420133 1290 ntBASIC7.51□□□□□ -1.21
CUX2O14529 NPM1P34-201ENST00000428821 893 ntBASIC7.51□□□□□ -1.21
CUX2O14529 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.51□□□□□ -1.21
CUX2O14529 RPL5P23-201ENST00000496040 868 ntBASIC7.51□□□□□ -1.21
CUX2O14529 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.51□□□□□ -1.21
CUX2O14529 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.51□□□□□ -1.21
CUX2O14529 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.51□□□□□ -1.21
CUX2O14529 AC006349.1-201ENST00000555526 235 ntBASIC7.51□□□□□ -1.21
CUX2O14529 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CUX2O14529 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.51□□□□□ -1.21
CUX2O14529 AC140113.4-201ENST00000622087 222 ntBASIC7.51□□□□□ -1.21
CUX2O14529 AL354798.1-201ENST00000622505 329 ntBASIC7.51□□□□□ -1.21
CUX2O14529 CCT7-217ENST00000626868 249 ntTSL 5 BASIC7.51□□□□□ -1.21
CUX2O14529 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.51□□□□□ -1.21
CUX2O14529 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CUX2O14529 NOL8P1-201ENST00000508336 3529 ntBASIC7.51□□□□□ -1.21
CUX2O14529 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUX2O14529 AC104333.2-201ENST00000422630 192 ntBASIC7.5□□□□□ -1.21
CUX2O14529 NPM1P26-201ENST00000426339 738 ntBASIC7.5□□□□□ -1.21
CUX2O14529 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.5□□□□□ -1.21
CUX2O14529 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.5□□□□□ -1.21
CUX2O14529 RPL35AP21-201ENST00000437667 333 ntBASIC7.5□□□□□ -1.21
CUX2O14529 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.5□□□□□ -1.21
CUX2O14529 AL592156.1-201ENST00000508758 304 ntBASIC7.5□□□□□ -1.21
CUX2O14529 RNU1-95P-201ENST00000516357 160 ntBASIC7.5□□□□□ -1.21
CUX2O14529 RNU1-128P-201ENST00000516704 160 ntBASIC7.5□□□□□ -1.21
CUX2O14529 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.5□□□□□ -1.21
CUX2O14529 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.5□□□□□ -1.21
CUX2O14529 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.5□□□□□ -1.21
CUX2O14529 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC7.5□□□□□ -1.21
CUX2O14529 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUX2O14529 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUX2O14529 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.5□□□□□ -1.21
CUX2O14529 AC016588.2-201ENST00000632484 3021 ntBASIC7.5□□□□□ -1.21
CUX2O14529 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms