Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RNU6-729P-201ENST00000384399 107 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AL359694.1-201ENST00000403247 604 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC007562.1-201ENST00000421819 517 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC133104.1-201ENST00000429100 218 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 PSMD10P2-201ENST00000432890 672 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 CBX1P1-201ENST00000440184 427 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC023274.2-201ENST00000445264 521 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 PFN1P11-201ENST00000445829 389 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 MORF4-201ENST00000447135 971 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC132479.1-201ENST00000449160 144 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RPL12P31-201ENST00000478433 450 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC111000.3-201ENST00000508057 576 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RNU6-1003P-201ENST00000517099 105 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AL157394.1-201ENST00000562983 1224 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC034268.2-201ENST00000571784 482 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RPS3AP23-202ENST00000574601 686 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 HMGN1P30-201ENST00000589286 268 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AL391646.1-201ENST00000603860 190 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC090948.2-201ENST00000607363 564 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC090574.1-201ENST00000623186 233 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 OR11H5P-202ENST00000641612 1325 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AL121768.1-201ENST00000613917 2544 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC015799.1-201ENST00000622996 3122 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC011455.2-201ENST00000599320 3336 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL355834.1-201ENST00000556602 3965 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 RNA5SP114-201ENST00000363780 113 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 GNG5P2-201ENST00000372054 207 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL121972.1-201ENST00000402023 252 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 HMGB1P17-201ENST00000403495 628 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 RSU1P3-201ENST00000412878 835 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 ANXA2P2-201ENST00000435128 1020 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 MTND4P19-201ENST00000446659 478 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 MTND1P18-201ENST00000448191 573 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 OR52E7P-201ENST00000452394 933 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 MTCO1P42-201ENST00000457379 726 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 RPL7AP23-201ENST00000482625 776 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 MTND1P3-201ENST00000484956 952 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC114728.1-201ENST00000488289 483 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 HMGN1P13-201ENST00000505795 138 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC006390.1-201ENST00000508068 283 ntBASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.65□□□□□ -1.5
SHISA3A0PJX4 DCAF13P2-201ENST00000514188 555 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms