Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC009318.3-201ENST00000616916 503 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 DHX9P1-201ENST00000436565 3076 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 RNA5SP191-201ENST00000362585 102 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 RNU6-98P-201ENST00000384173 107 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 RNU6-796P-201ENST00000391086 107 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AL158825.1-201ENST00000414735 521 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 E2F6P2-201ENST00000420708 748 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AL358176.3-201ENST00000420757 454 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC023128.2-201ENST00000420880 1223 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC007559.1-201ENST00000428736 355 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 OR2B7P-201ENST00000429302 934 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 RPL12P28-201ENST00000430852 489 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AL451139.1-201ENST00000434718 346 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 PRPF38AP2-201ENST00000438179 851 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC234781.3-201ENST00000452540 973 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 EIF2S2P5-201ENST00000457635 968 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 NDUFA5P12-201ENST00000503796 343 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 IGKV2-36-201ENST00000519999 223 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC106734.1-201ENST00000568646 663 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 MIR4646-201ENST00000580775 63 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC110743.1-201ENST00000584870 478 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC011487.3-201ENST00000593607 453 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC098483.2-201ENST00000603158 454 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 MIR8084-201ENST00000614105 89 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC012414.7-202ENST00000622705 1090 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC106730.3-201ENST00000624568 641 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AP000720.1-201ENST00000625091 483 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 CASC19-206ENST00000641028 1430 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 HSPA8P19-201ENST00000505359 1517 ntBASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
BLOC1S4Q9NUP1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 OR52E6-202ENST00000379946 954 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RNU4-27P-201ENST00000410889 139 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 COX6B1P1-201ENST00000415962 213 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC008173.1-201ENST00000418901 264 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC004074.1-201ENST00000421810 1063 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RPL7P57-201ENST00000423238 740 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RPL37P3-201ENST00000456825 293 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RPL21P47-201ENST00000483696 477 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC020890.1-201ENST00000491837 504 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 SCARNA22-201ENST00000503991 125 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC106806.2-201ENST00000509365 500 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC027104.1-201ENST00000563702 681 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC090948.2-201ENST00000607363 564 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC015804.1-201ENST00000622935 435 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms