Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 OR52B5P-204ENST00000641744 3467 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 SF3A3P1-201ENST00000446317 1477 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AL360271.1-201ENST00000395679 510 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 ARF4P3-201ENST00000397387 509 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AL603908.1-201ENST00000406098 201 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 MIR548F5-201ENST00000408421 86 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 RNU2-29P-201ENST00000410423 189 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 YWHAZP3-201ENST00000415292 738 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AL161454.1-201ENST00000446226 569 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 HMGB1P15-201ENST00000453854 435 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 RN7SL83P-201ENST00000468131 297 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC004062.1-201ENST00000509926 645 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC017037.2-201ENST00000513850 890 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 RN7SKP295-201ENST00000517264 153 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 HMGB1P19-201ENST00000517578 577 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC090607.2-201ENST00000560331 695 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 MIR4428-201ENST00000584884 73 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC092032.1-201ENST00000603090 165 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 AC097714.1-201ENST00000511272 1647 ntBASIC7.47□□□□□ -1.21
PHOX2BQ99453 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PHOX2BQ99453 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.47□□□□□ -1.21
PHOX2BQ99453 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 ELL2P4-201ENST00000446870 1376 ntBASIC7.46□□□□□ -1.21
PHOX2BQ99453 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.46□□□□□ -1.21
PHOX2BQ99453 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PHOX2BQ99453 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
PHOX2BQ99453 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC7.46□□□□□ -1.21
PHOX2BQ99453 AC008555.1-201ENST00000561778 2757 ntBASIC7.46□□□□□ -1.21
PHOX2BQ99453 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 Y_RNA.176-201ENST00000363815 109 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 RNU6-522P-201ENST00000364497 107 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 RNU6-505P-201ENST00000384427 107 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 FAUP2-201ENST00000394301 401 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AL121834.1-202ENST00000404494 277 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 Z93019.1-201ENST00000416450 973 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC234781.4-201ENST00000419384 244 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms