Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPS18P6-201ENST00000476880 458 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC004980.4-201ENST00000513375 203 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC023762.1-201ENST00000603280 584 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC020910.3-201ENST00000603701 874 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 ELOCP34-201ENST00000604436 327 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 FAM27B-201ENST00000610601 213 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AL353726.1-201ENST00000614041 1000 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC021106.3-201ENST00000623925 531 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AL049767.1-202ENST00000637826 242 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 AC007529.1-201ENST00000418574 2178 ntBASIC3.36□□□□□ -1.87
AP1S3Q96PC3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.36□□□□□ -1.87
AP1S3Q96PC3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC022893.2-201ENST00000564832 3296 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RNU1-87P-201ENST00000363727 170 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RN7SKP160-201ENST00000363804 340 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 MIR223-201ENST00000385204 110 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC019050.1-201ENST00000418508 492 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC062016.2-201ENST00000420950 676 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RPL24P2-201ENST00000421023 475 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 MTND2P2-201ENST00000434633 945 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RHOT1P3-201ENST00000436571 331 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 GSTA7P-201ENST00000438425 448 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL645939.1-201ENST00000453429 797 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RPS5P7-201ENST00000456664 608 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 MTND6P32-201ENST00000457611 483 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC091868.1-201ENST00000508746 304 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC090568.1-201ENST00000509499 856 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RNA5SP446-201ENST00000515955 82 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 SNORD116-26-201ENST00000516006 96 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 NARSP2-201ENST00000518524 679 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL109741.3-201ENST00000561748 592 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AGGF1P8-201ENST00000562979 1000 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 MIR4644-201ENST00000579929 84 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC123786.2-201ENST00000603459 275 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL391358.1-201ENST00000605342 190 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL139041.1-201ENST00000605480 610 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 HMGB1P50-201ENST00000605814 607 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 AC007497.1-201ENST00000610421 561 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.35□□□□□ -1.87
AP1S3Q96PC3 NCLP2-201ENST00000416078 1462 ntBASIC3.35□□□□□ -1.87
AP1S3Q96PC3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 SNORA71.2-201ENST00000364941 134 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 RN7SKP267-201ENST00000410381 285 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AL138787.1-202ENST00000437804 898 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 PA2G4P6-201ENST00000438325 1197 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AURKAPS1-201ENST00000451805 1212 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC092905.1-201ENST00000467527 949 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 S100A11P1-201ENST00000477525 312 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC090013.1-201ENST00000485147 480 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 AC008897.1-201ENST00000494006 347 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 MRPS33P2-201ENST00000507850 322 ntBASIC3.34□□□□□ -1.87
AP1S3Q96PC3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms