Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SKP1P3-201ENST00000429280 487 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 NPM1P25-201ENST00000429734 854 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.04□□□□□ -1.44
USP47Q96K76 RN7SL604P-201ENST00000492589 296 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.04□□□□□ -1.44
USP47Q96K76 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP47Q96K76 AC006064.5-201ENST00000541782 248 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AC107993.1-201ENST00000591343 684 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.04□□□□□ -1.44
USP47Q96K76 IPO5P1-202ENST00000600039 287 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AL161729.3-201ENST00000603533 673 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AC026979.4-201ENST00000606555 645 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 FAM27D1-201ENST00000612308 341 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 BNIP3P41-202ENST00000616656 861 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AC023509.5-201ENST00000617434 807 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.03□□□□□ -1.44
USP47Q96K76 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.03□□□□□ -1.44
USP47Q96K76 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.03□□□□□ -1.44
USP47Q96K76 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.03□□□□□ -1.44
USP47Q96K76 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP47Q96K76 RNA5SP372-201ENST00000390836 115 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 AL445189.1-201ENST00000405722 338 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 RNA5SP36-201ENST00000410197 133 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.03□□□□□ -1.44
USP47Q96K76 SERPINA7P1-201ENST00000443077 631 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.03□□□□□ -1.44
USP47Q96K76 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 MED28P5-201ENST00000528254 438 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.03□□□□□ -1.44
USP47Q96K76 AC124068.1-201ENST00000563131 678 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.03□□□□□ -1.44
USP47Q96K76 AC034229.5-201ENST00000624258 185 ntBASIC6.03□□□□□ -1.44
USP47Q96K76 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
USP47Q96K76 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP47Q96K76 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USP47Q96K76 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USP47Q96K76 AL122126.1-201ENST00000546905 1318 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.02□□□□□ -1.45
USP47Q96K76 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USP47Q96K76 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.02□□□□□ -1.45
USP47Q96K76 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USP47Q96K76 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USP47Q96K76 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 TCP1P3-201ENST00000414406 1498 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 MIR383-201ENST00000362257 73 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 RNU1-94P-201ENST00000362627 173 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 RN7SKP74-201ENST00000362849 309 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP47Q96K76 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
USP47Q96K76 RPL32P23-201ENST00000397237 405 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 ATP5F1P2-201ENST00000398143 760 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.02□□□□□ -1.45
USP47Q96K76 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.02□□□□□ -1.45
USP47Q96K76 UQCRHP4-201ENST00000471686 272 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
USP47Q96K76 RNA5SP360-201ENST00000516555 118 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 AC068993.1-201ENST00000546724 589 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.02□□□□□ -1.45
USP47Q96K76 AC034105.4-201ENST00000568304 277 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 AL138721.1-201ENST00000616756 179 ntBASIC6.02□□□□□ -1.45
USP47Q96K76 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USP47Q96K76 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
USP47Q96K76 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.01□□□□□ -1.45
USP47Q96K76 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USP47Q96K76 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
USP47Q96K76 AC017104.4-201ENST00000636283 1592 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.01□□□□□ -1.45
USP47Q96K76 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.01□□□□□ -1.45
USP47Q96K76 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.01□□□□□ -1.45
USP47Q96K76 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 AL389915.1-201ENST00000422463 466 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 AL512326.1-201ENST00000443050 721 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.01□□□□□ -1.45
USP47Q96K76 AC005008.1-201ENST00000456151 612 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 SNORA84-201ENST00000459229 133 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 AC012158.1-204ENST00000483430 465 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.01□□□□□ -1.45
USP47Q96K76 AC020593.1-201ENST00000507399 299 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP47Q96K76 AC008694.2-201ENST00000517591 306 ntBASIC6.01□□□□□ -1.45
USP47Q96K76 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms