Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AL357078.2-201ENST00000416486 427 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 RPS26P40-201ENST00000435209 294 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC091180.1-201ENST00000462104 372 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 RPS21P4-201ENST00000487122 248 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC008565.1-201ENST00000509046 885 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC110792.2-201ENST00000510278 224 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC005351.1-201ENST00000511152 786 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 TCP11X3P-202ENST00000514289 1254 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 RNA5SP303-201ENST00000516192 130 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 C1DP5-201ENST00000525775 383 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 DEFB109D-201ENST00000529497 240 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC007225.2-201ENST00000562529 256 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 EIF1P6-201ENST00000600054 334 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 SNORD91B-202ENST00000608459 222 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AL445493.3-201ENST00000619568 477 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 CYP4F35P-202ENST00000636121 390 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 SCARNA15-201ENST00000607520 4325 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 NSRP1P1-201ENST00000444067 1693 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 RNA5SP183-201ENST00000362452 119 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AL121834.1-202ENST00000404494 277 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 RPL17P35-201ENST00000432217 549 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AL450023.3-201ENST00000440592 271 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 TXNP5-201ENST00000441043 315 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 RNFT1P2-201ENST00000443064 757 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AL606490.1-201ENST00000452266 765 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 RN7SL443P-201ENST00000464331 290 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 PGAM1P13-201ENST00000507497 754 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC133963.2-201ENST00000513686 578 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 MIR3176-201ENST00000582210 90 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC069307.1-201ENST00000602820 447 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AP000864.1-201ENST00000609424 650 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 MIR6864-201ENST00000617935 70 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC015804.1-201ENST00000622935 435 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms