Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC168Q8NDH2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 RNU1-83P-201ENST00000363426 164 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 VN1R37P-201ENST00000419096 748 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 CYCSP43-201ENST00000438233 310 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC114495.1-201ENST00000441274 436 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC233982.1-201ENST00000451247 436 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC022336.1-201ENST00000475510 337 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC021193.1-201ENST00000511607 420 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 RN7SKP156-201ENST00000410308 342 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 PGBD4P4-201ENST00000509673 613 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 uc_338.13-201ENST00000618243 179 ntBASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC168Q8NDH2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 MFSD8-236ENST00000641509 4050 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 ARAFP1-201ENST00000422172 605 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC010460.1-201ENST00000507087 466 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 GMPSP1-201ENST00000514075 579 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 DUXAP2-201ENST00000519198 589 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 MIR7853-201ENST00000584820 132 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC027309.2-201ENST00000520566 192 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC092709.1-201ENST00000521355 1045 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC090181.2-201ENST00000602975 672 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AC090912.3-201ENST00000609775 533 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 MIR7151-201ENST00000617477 60 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC168Q8NDH2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 MTND5P1-201ENST00000445440 1375 ntBASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC168Q8NDH2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms