Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RPL22P18-201ENST00000417197 377 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 ETF1P3-201ENST00000430422 1160 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 FAR2P1-206ENST00000449736 709 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL691482.1-201ENST00000453255 87 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL133244.1-201ENST00000456007 258 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC106872.4-201ENST00000510050 523 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AP002373.2-201ENST00000541631 1060 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC040904.1-201ENST00000590850 223 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AP002906.1-201ENST00000603405 233 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC018618.2-201ENST00000604770 446 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC021755.4-201ENST00000616620 456 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC099494.2-201ENST00000623371 978 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.21□□□□□ -1.57
RFX6Q8HWS3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 RNU4-28P-201ENST00000364739 141 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 OR5M12P-201ENST00000423388 929 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 GTF3AP5-201ENST00000442645 697 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 ZNF886P-201ENST00000450781 723 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 GTF2IP12-201ENST00000456547 356 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC073073.1-201ENST00000493920 463 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 ATP5LP3-201ENST00000514223 304 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 RNU6-1308P-201ENST00000516817 103 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 FTH1P11-201ENST00000517577 551 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC012339.2-201ENST00000523996 453 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC009852.2-201ENST00000567898 485 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC023824.3-201ENST00000569003 562 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC008536.1-201ENST00000602872 669 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC093783.1-201ENST00000612976 329 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms