Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL591926.1-201ENST00000620542 217 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC015908.5-201ENST00000623289 343 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AP001052.1-201ENST00000626421 99 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC100757.1-201ENST00000616872 1835 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC093311.1-201ENST00000506586 2021 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC011755.1-201ENST00000623763 2049 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 ADAM5-202ENST00000399789 1942 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 RNU6-707P-201ENST00000364647 95 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 SNORA48.4-201ENST00000391089 134 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC093719.1-202ENST00000392735 373 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 ATP5F1P3-201ENST00000397213 657 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 MIR1203-201ENST00000408812 85 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 RN7SKP247-201ENST00000411094 308 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 NPM1P40-201ENST00000412758 733 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 RPSAP35-201ENST00000413753 818 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AL121878.1-201ENST00000418638 859 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 MTND4P20-201ENST00000424125 869 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC234781.2-201ENST00000426370 994 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 ARL4AP3-201ENST00000441452 574 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 UBE2D3P4-201ENST00000441973 436 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC016772.1-201ENST00000444170 1261 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC026348.1-201ENST00000462549 1053 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC073522.1-201ENST00000483312 377 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC104971.1-201ENST00000495117 578 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 IGBP1P4-201ENST00000503202 879 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC122718.2-201ENST00000505325 591 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 ENPP7P11-201ENST00000505915 627 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC016559.2-201ENST00000510759 359 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 OR5BM1P-201ENST00000512021 366 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 HMGN1P9-201ENST00000515212 298 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 CDC42P3-201ENST00000518493 633 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 POLR2KP1-201ENST00000553226 168 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 DUXAP1-201ENST00000556632 463 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 MTCYBP28-201ENST00000566728 1132 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 MIR3912-201ENST00000577566 105 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC063977.5-201ENST00000601044 974 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC108738.1-201ENST00000603703 237 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AL031281.1-201ENST00000604049 488 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AP005137.2-201ENST00000609238 400 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC122108.2-201ENST00000611946 526 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC048341.3-201ENST00000619323 491 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC073136.1-201ENST00000449426 2884 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AP005901.5-201ENST00000545779 1796 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 AC005332.5-201ENST00000591222 2919 ntBASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCHD4Q6ZW05 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.61
PTCHD4Q6ZW05 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD4Q6ZW05 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTCHD4Q6ZW05 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD4Q6ZW05 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCHD4Q6ZW05 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms