Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 NPM1P47-201ENST00000560843 856 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC116553.2-201ENST00000564203 463 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AL391358.1-201ENST00000605342 190 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 RPL21P136-201ENST00000605378 396 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC015802.5-201ENST00000607478 399 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC139769.3-201ENST00000618383 175 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC091948.2-201ENST00000636510 279 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC100778.3-201ENST00000580060 1750 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AL034370.1-201ENST00000397254 1590 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC008758.3-201ENST00000507003 1829 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 RNVU1-6-201ENST00000364688 164 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 U3.30-201ENST00000391308 210 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 RPS24P12-201ENST00000402084 394 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 RN7SKP100-201ENST00000411258 284 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC105402.1-201ENST00000413336 545 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 RPL26P29-201ENST00000415623 438 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 GAPDHP49-201ENST00000421421 961 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 FABP7P2-201ENST00000429946 379 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 RPL23AP12-201ENST00000467573 473 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 RPS29P22-201ENST00000472363 168 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 SUMO1P1-201ENST00000497904 306 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 RN7SKP276-201ENST00000516242 268 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 RNU6-347P-201ENST00000516658 105 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC006518.1-201ENST00000541449 943 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC012414.2-201ENST00000559474 187 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC007423.1-201ENST00000605009 627 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 FAM27B-201ENST00000610601 213 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC104307.1-201ENST00000616142 196 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 CR381572.2-201ENST00000624852 397 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC024341.1-201ENST00000526444 1552 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.66□□□□□ -1.5
CCDC96Q2M329 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC96Q2M329 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CCDC96Q2M329 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC96Q2M329 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 NCLP2-201ENST00000416078 1462 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 AC012618.3-205ENST00000637896 1496 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AP001642.1-201ENST00000624727 2117 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC96Q2M329 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 RN7SKP216-201ENST00000411050 312 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 AC114755.2-201ENST00000413520 361 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 RPS12P5-201ENST00000423449 371 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 RPL12P34-201ENST00000424532 479 ntBASIC5.65□□□□□ -1.5
CCDC96Q2M329 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC96Q2M329 AC006967.1-201ENST00000467608 589 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms