Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 CDY11P-201ENST00000447168 1651 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC010401.2-201ENST00000575137 4934 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 RPL31P1-201ENST00000398116 372 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 USP9YP13-201ENST00000417797 480 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 LINC00993-201ENST00000420453 540 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AL389915.1-201ENST00000422463 466 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC008850.1-201ENST00000427546 362 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC073464.1-201ENST00000429823 534 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 BX322784.1-201ENST00000455793 1077 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC092865.4-201ENST00000477936 615 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC073522.1-201ENST00000483312 377 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC114728.1-201ENST00000488289 483 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 PSMA2P2-201ENST00000504319 686 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 CDH12P2-201ENST00000504393 298 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC114786.4-201ENST00000508771 728 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 RPL7L1P4-201ENST00000513004 707 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 LRRC34P2-201ENST00000514850 553 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 SNORD46.2-201ENST00000516021 102 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 CDC42P3-201ENST00000518493 633 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 IGKV3D-34-201ENST00000522638 302 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC025260.1-201ENST00000548858 430 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX4Q06945 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC092121.1-201ENST00000569452 202 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 MIR4776-2-201ENST00000580204 80 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 AP000942.4-201ENST00000604811 241 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC018690.1-201ENST00000608144 626 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AL020991.1-201ENST00000612314 373 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AL021918.2-201ENST00000613415 194 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AC073348.1-201ENST00000623002 331 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AP000648.2-201ENST00000624182 404 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SOX4Q06945 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX4Q06945 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX4Q06945 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX4Q06945 AC008957.3-201ENST00000624112 2242 ntBASIC6.49□□□□□ -1.37
SOX4Q06945 OLMALINC-203ENST00000641087 3779 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 AL034370.1-201ENST00000397254 1590 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SOX4Q06945 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 RNU5F-6P-201ENST00000362979 116 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 SNORA63-201ENST00000363450 132 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 RNU6-1090P-201ENST00000364065 94 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 RNA5SP510-201ENST00000364697 99 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 Y_RNA.295-201ENST00000364918 102 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 RNU6-1263P-201ENST00000384601 106 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 CALM2P3-201ENST00000400429 449 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 SNRPEP6-201ENST00000407465 277 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC007562.1-201ENST00000421819 517 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 HSPE1P16-201ENST00000426640 348 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms