Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC092447.2-201ENST00000435487 669 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 UBE2V1P3-201ENST00000439651 417 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AL133244.1-201ENST00000456007 258 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 RPS29P22-201ENST00000472363 168 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC007686.1-201ENST00000488511 463 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC091917.2-201ENST00000505002 744 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 RNA5SP497-201ENST00000516081 97 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 CDH12P4-201ENST00000517835 295 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 CDH12P3-201ENST00000517935 295 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 CDH12P1-201ENST00000518435 295 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AP006289.1-201ENST00000538089 277 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC068790.7-201ENST00000602347 528 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HMGCS1Q01581 OR51C1P-202ENST00000641159 1444 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS1Q01581 AL450326.2-201ENST00000421913 1962 ntBASIC4.27□□□□□ -1.73
HMGCS1Q01581 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMGCS1Q01581 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 CYB5AP4-201ENST00000396692 399 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 RPS16P5-201ENST00000406501 404 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 VN1R8P-201ENST00000407739 893 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 RPL37P18-201ENST00000411602 243 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC096644.3-201ENST00000416788 338 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 SKP1P3-201ENST00000429280 487 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 PSMC1P13-201ENST00000458195 985 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 AF186190.1-201ENST00000517470 480 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC025857.1-201ENST00000525252 377 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC137768.1-201ENST00000549998 553 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 VPS35P1-201ENST00000563400 1518 ntBASIC4.26□□□□□ -1.73
HMGCS1Q01581 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCS1Q01581 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGCS1Q01581 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCS1Q01581 SNORA70F-201ENST00000384142 135 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 RN7SKP216-201ENST00000411050 312 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 SNORA74C-2-201ENST00000411179 201 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 RAB9AP4-201ENST00000415230 609 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 UBE2V2P1-201ENST00000434717 398 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 MAPRE1P3-201ENST00000435438 796 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AP000936.3-201ENST00000438127 255 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 PTMAP3-201ENST00000447474 330 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 VN1R32P-201ENST00000452234 905 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 CCNHP1-201ENST00000513311 678 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGCS1Q01581 RPL23AP97-201ENST00000568955 471 ntBASIC4.25□□□□□ -1.73
HMGCS1Q01581 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms