Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 COX5BP7-201ENST00000414780 274 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO4P61968 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 CYCSP11-201ENST00000436426 315 ntBASIC4.04□□□□□ -1.76
LMO4P61968 MTCYBP31-201ENST00000438855 1122 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO4P61968 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO4P61968 PRPF38AP1-201ENST00000451976 933 ntBASIC4.04□□□□□ -1.76
LMO4P61968 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 CABYRP1-201ENST00000465493 1045 ntBASIC4.04□□□□□ -1.76
LMO4P61968 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.04□□□□□ -1.76
LMO4P61968 SCARNA22-201ENST00000503991 125 ntBASIC4.04□□□□□ -1.76
LMO4P61968 ENPP7P9-201ENST00000514456 627 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.04□□□□□ -1.76
LMO4P61968 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 HMGB1P46-201ENST00000520062 610 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LMO4P61968 UBTFL9-201ENST00000534504 1148 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 MRPS36P5-201ENST00000551909 298 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.04□□□□□ -1.76
LMO4P61968 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.04□□□□□ -1.76
LMO4P61968 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO4P61968 MIR4509-3-201ENST00000578671 94 ntBASIC4.04□□□□□ -1.76
LMO4P61968 MIR4509-2-201ENST00000583920 94 ntBASIC4.04□□□□□ -1.76
LMO4P61968 NIFKP6-201ENST00000598115 845 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC234772.3-201ENST00000602277 528 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC104687.2-201ENST00000604442 342 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AC100847.1-201ENST00000611316 481 ntBASIC4.04□□□□□ -1.76
LMO4P61968 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
LMO4P61968 MIR4509-1-201ENST00000618224 94 ntBASIC4.04□□□□□ -1.76
LMO4P61968 AL355493.4-201ENST00000618530 292 ntBASIC4.04□□□□□ -1.76
LMO4P61968 MIR6853-201ENST00000619642 74 ntBASIC4.04□□□□□ -1.76
LMO4P61968 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
LMO4P61968 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
LMO4P61968 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 AC027228.2-201ENST00000567141 2154 ntBASIC4.03□□□□□ -1.76
LMO4P61968 HSPD1P14-201ENST00000432666 1618 ntBASIC4.03□□□□□ -1.76
LMO4P61968 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.03□□□□□ -1.76
LMO4P61968 OR9K1P-202ENST00000641111 3217 ntBASIC4.03□□□□□ -1.76
LMO4P61968 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO4P61968 AC008758.3-201ENST00000507003 1829 ntBASIC4.03□□□□□ -1.76
LMO4P61968 ZNF29P-201ENST00000225587 168 ntBASIC4.03□□□□□ -1.76
LMO4P61968 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LMO4P61968 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO4P61968 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 AC016397.1-201ENST00000412463 242 ntBASIC4.03□□□□□ -1.76
LMO4P61968 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO4P61968 QRSL1P2-201ENST00000418582 964 ntBASIC4.03□□□□□ -1.76
LMO4P61968 ZNF885P-201ENST00000420174 1098 ntBASIC4.03□□□□□ -1.76
LMO4P61968 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.03□□□□□ -1.76
LMO4P61968 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.03□□□□□ -1.76
LMO4P61968 XKRYP1-201ENST00000423438 492 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC092648.1-201ENST00000425870 423 ntBASIC4.03□□□□□ -1.76
LMO4P61968 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC013262.1-201ENST00000426710 252 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.03□□□□□ -1.76
LMO4P61968 NDUFA5P10-201ENST00000432147 357 ntBASIC4.03□□□□□ -1.76
LMO4P61968 XKRYP2-201ENST00000432915 492 ntBASIC4.03□□□□□ -1.76
LMO4P61968 MTCYBP12-201ENST00000440559 1134 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AL035551.1-201ENST00000446931 348 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LMO4P61968 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO4P61968 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 RPL5P22-201ENST00000480199 884 ntBASIC4.03□□□□□ -1.76
LMO4P61968 RPL7AP10-201ENST00000481016 791 ntBASIC4.03□□□□□ -1.76
LMO4P61968 RN7SL346P-201ENST00000491561 294 ntBASIC4.03□□□□□ -1.76
LMO4P61968 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.03□□□□□ -1.76
LMO4P61968 ENPP7P11-201ENST00000505915 627 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
LMO4P61968 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms