Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.23□□□□□ -1.41
ERVFC1P60507 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.23□□□□□ -1.41
ERVFC1P60507 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.23□□□□□ -1.41
ERVFC1P60507 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.23□□□□□ -1.41
ERVFC1P60507 BMS1P7-201ENST00000602440 1052 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
ERVFC1P60507 AC104260.1-201ENST00000616660 539 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 AP005264.7-201ENST00000625003 745 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 AC099063.3-201ENST00000642066 185 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERVFC1P60507 AC022905.1-201ENST00000503430 3048 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.23□□□□□ -1.41
ERVFC1P60507 AC092692.1-201ENST00000623625 2595 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERVFC1P60507 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERVFC1P60507 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERVFC1P60507 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
ERVFC1P60507 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERVFC1P60507 AC007159.1-201ENST00000566529 4706 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 AC114786.1-201ENST00000512892 1415 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
ERVFC1P60507 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ERVFC1P60507 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.23□□□□□ -1.41
ERVFC1P60507 MRRFP1-201ENST00000435941 1675 ntBASIC6.23□□□□□ -1.41
ERVFC1P60507 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ERVFC1P60507 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERVFC1P60507 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC073055.1-201ENST00000456901 1621 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AOX3P-204ENST00000491025 2107 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ERVFC1P60507 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ERVFC1P60507 Y_RNA.256-201ENST00000364594 104 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 CIR1P3-201ENST00000405137 479 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 MIR1286-201ENST00000408112 78 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 Z97055.1-201ENST00000419730 712 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 RNGTTP1-201ENST00000420965 728 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 AL662791.1-201ENST00000441992 928 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 HMGB1P5-202ENST00000451497 985 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 DNAJC19P1-201ENST00000455312 319 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 MTND1P11-201ENST00000456661 876 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC009120.1-201ENST00000493458 473 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 NDUFA5P12-201ENST00000503796 343 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC025459.1-201ENST00000504072 156 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC109445.1-201ENST00000512356 383 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC025465.4-201ENST00000513422 638 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 RNU6-507P-201ENST00000516045 100 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.22□□□□□ -1.41
ERVFC1P60507 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 OR5AL2P-201ENST00000532185 920 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 RAB11AP2-201ENST00000545905 639 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.22□□□□□ -1.41
ERVFC1P60507 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC044792.1-201ENST00000593294 196 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC103881.1-201ENST00000603476 538 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC009994.1-201ENST00000606889 253 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC099676.1-201ENST00000608886 657 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 Y_RNA.804-201ENST00000615262 101 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AL136981.2-201ENST00000617319 734 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 AC112204.3-201ENST00000623822 332 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AL157786.1-207ENST00000627771 695 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 LRRC77P-213ENST00000637727 880 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 AC016583.1-201ENST00000624221 2431 ntBASIC6.22□□□□□ -1.41
ERVFC1P60507 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
ERVFC1P60507 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ERVFC1P60507 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERVFC1P60507 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms