Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP98P52948 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP98P52948 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 MIR208A-201ENST00000362287 71 ntBASIC5.23□□□□□ -1.57
NUP98P52948 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP98P52948 RPL23AP25-201ENST00000430973 463 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP98P52948 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.23□□□□□ -1.57
NUP98P52948 AL445433.1-201ENST00000457507 257 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC146944.2-203ENST00000502493 354 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC139495.1-202ENST00000513164 354 ntBASIC5.23□□□□□ -1.57
NUP98P52948 NDUFB4P12-201ENST00000513465 390 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC107982.3-201ENST00000584957 985 ntBASIC5.23□□□□□ -1.57
NUP98P52948 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.23□□□□□ -1.57
NUP98P52948 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 AL121772.2-201ENST00000614331 297 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP98P52948 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP98P52948 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP98P52948 USP9YP4-201ENST00000424401 1745 ntBASIC5.22□□□□□ -1.57
NUP98P52948 AL513548.1-201ENST00000562904 1724 ntBASIC5.22□□□□□ -1.57
NUP98P52948 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
NUP98P52948 AL672167.1-205ENST00000641112 3080 ntBASIC5.22□□□□□ -1.57
NUP98P52948 CYP1D1P-201ENST00000416662 1433 ntBASIC5.22□□□□□ -1.57
NUP98P52948 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP98P52948 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUP98P52948 OR8F1P-201ENST00000425243 930 ntBASIC5.22□□□□□ -1.57
NUP98P52948 PRELID3BP10-201ENST00000431957 584 ntBASIC5.22□□□□□ -1.57
NUP98P52948 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP98P52948 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.22□□□□□ -1.57
NUP98P52948 RPL5P32-201ENST00000454085 879 ntBASIC5.22□□□□□ -1.57
NUP98P52948 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP98P52948 MTND4LP31-201ENST00000514859 294 ntBASIC5.22□□□□□ -1.57
NUP98P52948 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.22□□□□□ -1.57
NUP98P52948 CYCSP28-201ENST00000534284 321 ntBASIC5.22□□□□□ -1.57
NUP98P52948 CASC19-261ENST00000641853 1638 ntBASIC5.22□□□□□ -1.57
NUP98P52948 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NUP98P52948 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP98P52948 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP98P52948 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP98P52948 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP98P52948 AC017104.4-201ENST00000636283 1592 ntBASIC5.21□□□□□ -1.57
NUP98P52948 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NUP98P52948 RN7SKP186-201ENST00000365371 303 ntBASIC5.21□□□□□ -1.58
NUP98P52948 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
NUP98P52948 SNORD66.1-201ENST00000391230 76 ntBASIC5.21□□□□□ -1.58
NUP98P52948 RN7SKP202-201ENST00000410439 330 ntBASIC5.21□□□□□ -1.58
NUP98P52948 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.21□□□□□ -1.58
NUP98P52948 HMGN2P27-201ENST00000427352 270 ntBASIC5.21□□□□□ -1.58
NUP98P52948 RPL7P2-201ENST00000427639 268 ntBASIC5.21□□□□□ -1.58
NUP98P52948 BX119904.3-201ENST00000428194 957 ntBASIC5.21□□□□□ -1.58
NUP98P52948 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.21□□□□□ -1.58
NUP98P52948 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.21□□□□□ -1.58
NUP98P52948 AC112206.1-201ENST00000468416 477 ntBASIC5.21□□□□□ -1.58
NUP98P52948 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.21□□□□□ -1.58
NUP98P52948 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.21□□□□□ -1.58
NUP98P52948 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.21□□□□□ -1.58
NUP98P52948 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.21□□□□□ -1.58
NUP98P52948 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.21□□□□□ -1.58
NUP98P52948 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.21□□□□□ -1.58
NUP98P52948 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NUP98P52948 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
NUP98P52948 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUP98P52948 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NUP98P52948 MIR1271-201ENST00000408537 86 ntBASIC5.2□□□□□ -1.58
NUP98P52948 BMS1P19-201ENST00000433925 393 ntBASIC5.2□□□□□ -1.58
NUP98P52948 RPS26P2-201ENST00000440331 348 ntBASIC5.2□□□□□ -1.58
NUP98P52948 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.2□□□□□ -1.58
NUP98P52948 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 AL352979.3-201ENST00000553515 247 ntBASIC5.2□□□□□ -1.58
NUP98P52948 AC027176.2-201ENST00000559166 746 ntBASIC5.2□□□□□ -1.58
NUP98P52948 CCDC58P3-201ENST00000590792 430 ntBASIC5.2□□□□□ -1.58
NUP98P52948 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NUP98P52948 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUP98P52948 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUP98P52948 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP98P52948 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP98P52948 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUP98P52948 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUP98P52948 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NUP98P52948 RNA5SP399-201ENST00000364003 117 ntBASIC5.2□□□□□ -1.58
NUP98P52948 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms