Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.54□□□□□ -1.68
HTTP42858 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.54□□□□□ -1.68
HTTP42858 RN7SL853P-201ENST00000617250 223 ntBASIC4.54□□□□□ -1.68
HTTP42858 NOL8P1-201ENST00000508336 3529 ntBASIC4.54□□□□□ -1.68
HTTP42858 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
HTTP42858 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HTTP42858 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.53□□□□□ -1.68
HTTP42858 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 HSPD1P21-201ENST00000436541 245 ntBASIC4.53□□□□□ -1.68
HTTP42858 AL591503.2-201ENST00000442314 1005 ntBASIC4.53□□□□□ -1.68
HTTP42858 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.53□□□□□ -1.68
HTTP42858 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.53□□□□□ -1.68
HTTP42858 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.53□□□□□ -1.68
HTTP42858 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.53□□□□□ -1.68
HTTP42858 EIF4BP1-201ENST00000554881 351 ntBASIC4.53□□□□□ -1.68
HTTP42858 GNRHR2P1-201ENST00000555315 631 ntBASIC4.53□□□□□ -1.68
HTTP42858 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.53□□□□□ -1.68
HTTP42858 AC012493.2-201ENST00000595083 291 ntBASIC4.53□□□□□ -1.68
HTTP42858 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.53□□□□□ -1.68
HTTP42858 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HTTP42858 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC4.53□□□□□ -1.68
HTTP42858 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 AC093829.1-201ENST00000506662 1618 ntBASIC4.53□□□□□ -1.68
HTTP42858 LPP-208ENST00000448637 5835 ntTSL 5 BASIC4.53□□□□□ -1.68
HTTP42858 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.53□□□□□ -1.68
HTTP42858 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 CYCSP4-201ENST00000429682 331 ntBASIC4.53□□□□□ -1.68
HTTP42858 AC017015.1-201ENST00000477387 286 ntBASIC4.53□□□□□ -1.68
HTTP42858 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.53□□□□□ -1.68
HTTP42858 AC107294.1-201ENST00000609524 467 ntBASIC4.53□□□□□ -1.68
HTTP42858 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.53□□□□□ -1.68
HTTP42858 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HTTP42858 AC123769.2-201ENST00000624332 5984 ntBASIC4.53□□□□□ -1.68
HTTP42858 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HTTP42858 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HTTP42858 AL390879.2-203ENST00000426943 1121 ntBASIC4.52□□□□□ -1.69
HTTP42858 AC017083.1-201ENST00000428093 483 ntBASIC4.52□□□□□ -1.69
HTTP42858 RPL36AP13-201ENST00000457490 317 ntBASIC4.52□□□□□ -1.69
HTTP42858 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.52□□□□□ -1.69
HTTP42858 AC130352.1-201ENST00000602979 661 ntBASIC4.52□□□□□ -1.69
HTTP42858 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HTTP42858 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HTTP42858 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HTTP42858 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HTTP42858 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HTTP42858 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HTTP42858 MIR1251-201ENST00000408552 70 ntBASIC4.52□□□□□ -1.69
HTTP42858 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 AC106707.2-201ENST00000484182 374 ntBASIC4.52□□□□□ -1.69
HTTP42858 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.52□□□□□ -1.69
HTTP42858 AC104619.4-201ENST00000510773 249 ntBASIC4.52□□□□□ -1.69
HTTP42858 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.52□□□□□ -1.69
HTTP42858 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.52□□□□□ -1.69
HTTP42858 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.52□□□□□ -1.69
HTTP42858 AC015914.2-201ENST00000618167 288 ntBASIC4.52□□□□□ -1.69
HTTP42858 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HTTP42858 NBPF8-201ENST00000583271 5330 ntBASIC4.52□□□□□ -1.69
HTTP42858 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HTTP42858 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.52□□□□□ -1.69
HTTP42858 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.52□□□□□ -1.69
HTTP42858 RNA5SP497-201ENST00000516081 97 ntBASIC4.52□□□□□ -1.69
HTTP42858 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.52□□□□□ -1.69
HTTP42858 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
HTTP42858 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.52□□□□□ -1.69
HTTP42858 AL031666.3-201ENST00000609320 1006 ntBASIC4.52□□□□□ -1.69
HTTP42858 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HTTP42858 AC140134.1-201ENST00000511830 3544 ntBASIC4.52□□□□□ -1.69
HTTP42858 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.52□□□□□ -1.69
HTTP42858 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.51□□□□□ -1.69
HTTP42858 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 AP000563.1-201ENST00000490865 758 ntBASIC4.51□□□□□ -1.69
HTTP42858 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.51□□□□□ -1.69
HTTP42858 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 AL353726.1-201ENST00000614041 1000 ntBASIC4.51□□□□□ -1.69
HTTP42858 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.51□□□□□ -1.69
HTTP42858 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms