Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC107027.3-201ENST00000565095 3473 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HOXA9P31269 RNA5SP388-201ENST00000362584 119 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 RNU6-1263P-201ENST00000384601 106 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 RPL21P108-201ENST00000413857 481 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 RPS3AP54-201ENST00000435535 734 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA9P31269 HMGB3P9-201ENST00000441799 583 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA9P31269 MTND4LP12-201ENST00000448237 295 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA9P31269 HSPE1P22-201ENST00000456856 327 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC105137.1-201ENST00000484355 562 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA9P31269 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA9P31269 AC074050.1-201ENST00000563247 211 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 CD24P2-201ENST00000565486 219 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA9P31269 VN1R85P-201ENST00000601587 426 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC023762.1-201ENST00000603280 584 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC113403.1-201ENST00000604910 193 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 ARF4P1-201ENST00000605447 541 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AL159169.2-201ENST00000610061 1269 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 AC024941.1-201ENST00000612250 334 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 ZYXP1-201ENST00000617638 118 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 uc_338.13-201ENST00000618243 179 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA9P31269 MIR492-201ENST00000638676 116 ntBASIC4.72□□□□□ -1.65
HOXA9P31269 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA9P31269 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA9P31269 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA9P31269 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXA9P31269 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HOXA9P31269 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HOXA9P31269 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA9P31269 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
HOXA9P31269 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA9P31269 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA9P31269 RPS26P4-201ENST00000431743 355 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA9P31269 BTG3P1-201ENST00000435859 716 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA9P31269 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 PTMAP3-201ENST00000447474 330 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 RHEBP2-201ENST00000450289 600 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA9P31269 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA9P31269 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA9P31269 RNA5SP249-201ENST00000516127 99 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXA9P31269 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 MIR8069-1-201ENST00000616627 86 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 AC010809.3-201ENST00000621310 641 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 MIR8069-2-201ENST00000621412 86 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 AC009950.2-201ENST00000636548 183 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 DDX18P3-201ENST00000404856 2007 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 AC126323.6-202ENST00000568092 3511 ntBASIC4.71□□□□□ -1.66
HOXA9P31269 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA9P31269 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA9P31269 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA9P31269 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA9P31269 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HOXA9P31269 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HOXA9P31269 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA9P31269 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HOXA9P31269 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXA9P31269 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 HCFC2P1-201ENST00000392864 1592 ntBASIC4.7□□□□□ -1.66
HOXA9P31269 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA9P31269 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA9P31269 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXA9P31269 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXA9P31269 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA9P31269 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXA9P31269 SNORA11F-201ENST00000408237 128 ntBASIC4.7□□□□□ -1.66
HOXA9P31269 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXA9P31269 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms