Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 GAPDHP49-201ENST00000421421 961 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 USP9YP18-201ENST00000425912 695 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MTCO1P54-201ENST00000430139 712 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 CYCSP51-201ENST00000443545 318 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AL137845.2-201ENST00000444292 988 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 ST13P20-201ENST00000447996 1065 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 FAR2P1-206ENST00000449736 709 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC022215.1-201ENST00000481770 362 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC099521.1-201ENST00000482557 334 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC005832.3-201ENST00000537929 631 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MRPS21P9-201ENST00000571150 257 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AL117336.2-201ENST00000602435 335 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AL353726.1-201ENST00000614041 1000 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC104260.1-201ENST00000616660 539 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC009704.2-201ENST00000618739 483 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 CU639417.4-201ENST00000623928 207 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC109780.1-201ENST00000451768 1344 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC235565.1-201ENST00000456962 1325 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CSB-PGBD3P0DP91 MAPK10-365ENST00000641902 3825 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC003973.3-201ENST00000624863 2822 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC008033.1-201ENST00000216407 1162 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AL121657.1-201ENST00000327215 531 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 SNORD65.1-201ENST00000390889 71 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 RN7SKP29-201ENST00000410957 272 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 TPMTP3-201ENST00000411928 735 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AL596448.1-201ENST00000415024 392 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC234781.4-201ENST00000419384 244 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AL590103.1-201ENST00000434488 307 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 DYNLL1P6-201ENST00000503440 264 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 FAM92A1P2-202ENST00000504766 877 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-615P-201ENST00000516065 106 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-506P-201ENST00000516553 94 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 HMGB1P42-201ENST00000532126 553 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 DPPA3P2-201ENST00000553589 478 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 IGBP1P1-201ENST00000554337 1009 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms