Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP3P08254 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP3P08254 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP3P08254 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP3P08254 AP001029.2-203ENST00000589795 4910 ntBASIC5.3□□□□□ -1.56
MMP3P08254 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP3P08254 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP3P08254 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
MMP3P08254 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
MMP3P08254 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
MMP3P08254 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP3P08254 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP3P08254 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
MMP3P08254 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP3P08254 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP3P08254 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 AC093909.5-201ENST00000621839 1799 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AC140134.1-201ENST00000511830 3544 ntBASIC5.29□□□□□ -1.56
MMP3P08254 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 OR56B2P-202ENST00000641377 2453 ntBASIC5.29□□□□□ -1.56
MMP3P08254 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 RNA5SP447-201ENST00000363749 119 ntBASIC5.29□□□□□ -1.56
MMP3P08254 RNU6-796P-201ENST00000391086 107 ntBASIC5.29□□□□□ -1.56
MMP3P08254 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.29□□□□□ -1.56
MMP3P08254 OR51B3P-201ENST00000412287 913 ntBASIC5.29□□□□□ -1.56
MMP3P08254 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 UQCRBP1-201ENST00000421129 336 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AL592293.2-201ENST00000422292 996 ntBASIC5.29□□□□□ -1.56
MMP3P08254 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 VN1R42P-201ENST00000424651 344 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AC013262.1-201ENST00000426710 252 ntBASIC5.29□□□□□ -1.56
MMP3P08254 FO393414.1-201ENST00000428697 1184 ntBASIC5.29□□□□□ -1.56
MMP3P08254 RPL12P28-201ENST00000430852 489 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AL451139.1-201ENST00000434718 346 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AC073143.1-201ENST00000436316 395 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AL353898.1-201ENST00000444055 238 ntBASIC5.29□□□□□ -1.56
MMP3P08254 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.29□□□□□ -1.56
MMP3P08254 RPL7P55-201ENST00000450522 746 ntBASIC5.29□□□□□ -1.56
MMP3P08254 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 AC104982.1-201ENST00000478775 574 ntBASIC5.29□□□□□ -1.56
MMP3P08254 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP3P08254 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP3P08254 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 AC084759.1-201ENST00000561168 290 ntBASIC5.29□□□□□ -1.56
MMP3P08254 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP3P08254 AC005034.4-201ENST00000603612 899 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AL159169.2-201ENST00000610061 1269 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP3P08254 AC006338.2-201ENST00000616864 791 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AC084824.4-201ENST00000620106 731 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AC097520.1-201ENST00000624435 385 ntBASIC5.29□□□□□ -1.56
MMP3P08254 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
MMP3P08254 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
MMP3P08254 AP005435.3-201ENST00000531260 3198 ntBASIC5.29□□□□□ -1.56
MMP3P08254 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP3P08254 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
MMP3P08254 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP3P08254 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP3P08254 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP3P08254 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.28□□□□□ -1.56
MMP3P08254 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.28□□□□□ -1.56
MMP3P08254 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MMP3P08254 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MMP3P08254 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
MMP3P08254 CASC19-260ENST00000641828 2001 ntBASIC5.28□□□□□ -1.56
MMP3P08254 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MMP3P08254 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.28□□□□□ -1.56
MMP3P08254 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.28□□□□□ -1.56
MMP3P08254 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
MMP3P08254 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
MMP3P08254 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.28□□□□□ -1.56
MMP3P08254 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
MMP3P08254 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
MMP3P08254 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MMP3P08254 OR13C3-201ENST00000374781 1108 ntBASIC5.28□□□□□ -1.56
MMP3P08254 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
MMP3P08254 AL049693.1-201ENST00000402760 611 ntBASIC5.28□□□□□ -1.56
MMP3P08254 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MMP3P08254 AC013429.2-201ENST00000418798 781 ntBASIC5.28□□□□□ -1.56
MMP3P08254 MTCYBP7-201ENST00000419540 1134 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms