Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 AC109446.4-201ENST00000623235 2755 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A2P05997 SNORA9-201ENST00000384215 133 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 RNU4-6P-201ENST00000410804 122 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 MTCO1P54-201ENST00000430139 712 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COL5A2P05997 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A2P05997 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.62□□□□□ -1.51
COL5A2P05997 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 AC022336.1-201ENST00000475510 337 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 PPP1R11P1-201ENST00000486095 376 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 LDHBP3-201ENST00000514909 822 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 AC120057.2-201ENST00000571520 271 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 AC017100.2-201ENST00000584628 355 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.62□□□□□ -1.51
COL5A2P05997 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 AC063952.1-203ENST00000634410 658 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
COL5A2P05997 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A2P05997 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 MAPK10-349ENST00000641767 3661 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL5A2P05997 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
COL5A2P05997 AC063923.1-201ENST00000478982 1619 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
COL5A2P05997 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A2P05997 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL5A2P05997 AC104623.2-202ENST00000623477 4002 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AC011755.1-201ENST00000623763 2049 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL5A2P05997 MIR921-201ENST00000401133 56 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AL050321.1-201ENST00000432363 400 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A2P05997 VN1R32P-201ENST00000452234 905 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A2P05997 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A2P05997 AC104164.2-201ENST00000496953 495 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AC006499.6-201ENST00000511169 607 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 RN7SKP157-201ENST00000516174 282 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.61□□□□□ -1.51
COL5A2P05997 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A2P05997 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.61□□□□□ -1.51
COL5A2P05997 AC022655.2-201ENST00000577280 318 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.61□□□□□ -1.51
COL5A2P05997 AC005520.3-201ENST00000602874 370 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 USP9YP4-201ENST00000424401 1745 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 AC073136.1-201ENST00000449426 2884 ntBASIC5.61□□□□□ -1.51
COL5A2P05997 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL5A2P05997 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A2P05997 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A2P05997 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A2P05997 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL5A2P05997 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.61□□□□□ -1.51
COL5A2P05997 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 AC123912.3-201ENST00000600907 1367 ntBASIC5.6□□□□□ -1.51
COL5A2P05997 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 RNU1-83P-201ENST00000363426 164 ntBASIC5.6□□□□□ -1.51
COL5A2P05997 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
COL5A2P05997 SNORA11C-201ENST00000408532 129 ntBASIC5.6□□□□□ -1.51
COL5A2P05997 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A2P05997 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A2P05997 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A2P05997 AC026403.1-201ENST00000518938 295 ntBASIC5.6□□□□□ -1.51
COL5A2P05997 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COL5A2P05997 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A2P05997 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A2P05997 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A2P05997 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 AC012468.1-201ENST00000604888 430 ntBASIC5.6□□□□□ -1.51
COL5A2P05997 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A2P05997 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.6□□□□□ -1.51
COL5A2P05997 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.6□□□□□ -1.51
COL5A2P05997 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.6□□□□□ -1.51
COL5A2P05997 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL5A2P05997 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.59□□□□□ -1.51
COL5A2P05997 CEACAMP1-201ENST00000434624 1035 ntBASIC5.59□□□□□ -1.51
COL5A2P05997 RPL23AP46-201ENST00000438548 490 ntBASIC5.59□□□□□ -1.51
COL5A2P05997 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.59□□□□□ -1.51
COL5A2P05997 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL5A2P05997 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.59□□□□□ -1.51
COL5A2P05997 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.59□□□□□ -1.51
COL5A2P05997 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.59□□□□□ -1.51
COL5A2P05997 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.59□□□□□ -1.51
COL5A2P05997 AL352979.3-201ENST00000553515 247 ntBASIC5.59□□□□□ -1.51
COL5A2P05997 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.59□□□□□ -1.51
COL5A2P05997 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.59□□□□□ -1.51
COL5A2P05997 AL606490.9-201ENST00000603331 271 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms