Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AP000648.2-201ENST00000624182 404 ntBASIC2.59□□□□□ -1.99
APOBP04114 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 CTSL3P-202ENST00000412179 788 ntBASIC2.59□□□□□ -1.99
APOBP04114 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBP04114 RPL23AP81-201ENST00000455252 467 ntBASIC2.59□□□□□ -1.99
APOBP04114 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBP04114 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC2.59□□□□□ -1.99
APOBP04114 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBP04114 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBP04114 ELOCP35-201ENST00000604289 336 ntBASIC2.59□□□□□ -1.99
APOBP04114 AC025175.1-201ENST00000606482 759 ntBASIC2.59□□□□□ -1.99
APOBP04114 AC116312.1-201ENST00000606841 314 ntBASIC2.59□□□□□ -1.99
APOBP04114 AC008833.1-201ENST00000611633 691 ntBASIC2.59□□□□□ -1.99
APOBP04114 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
APOBP04114 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.59□□□□□ -1.99
APOBP04114 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
APOBP04114 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBP04114 PCNPP4-201ENST00000414817 517 ntBASIC2.59□□□□□ -1.99
APOBP04114 RPL5P2-201ENST00000429598 854 ntBASIC2.59□□□□□ -1.99
APOBP04114 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.59□□□□□ -1.99
APOBP04114 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBP04114 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.59□□□□□ -1.99
APOBP04114 AC064801.1-201ENST00000612025 407 ntBASIC2.59□□□□□ -1.99
APOBP04114 AL645927.2-201ENST00000618350 349 ntBASIC2.59□□□□□ -1.99
APOBP04114 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
APOBP04114 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.59□□□□□ -2
APOBP04114 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC2.59□□□□□ -2
APOBP04114 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.59□□□□□ -2
APOBP04114 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC2.59□□□□□ -2
APOBP04114 AL672167.1-204ENST00000641875 3017 ntBASIC2.59□□□□□ -2
APOBP04114 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
APOBP04114 MTCO1P12-201ENST00000414273 1543 ntBASIC2.59□□□□□ -2
APOBP04114 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
APOBP04114 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
APOBP04114 RPS11P1-201ENST00000451072 473 ntBASIC2.59□□□□□ -2
APOBP04114 SNORA70.24-201ENST00000517233 118 ntBASIC2.59□□□□□ -2
APOBP04114 OR5B10P-201ENST00000532869 642 ntBASIC2.59□□□□□ -2
APOBP04114 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC2.59□□□□□ -2
APOBP04114 AL513477.2-201ENST00000607858 568 ntBASIC2.59□□□□□ -2
APOBP04114 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.59□□□□□ -2
APOBP04114 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
APOBP04114 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.59□□□□□ -2
APOBP04114 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC2.58□□□□□ -2
APOBP04114 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
APOBP04114 RPL7P58-201ENST00000402913 758 ntBASIC2.58□□□□□ -2
APOBP04114 CEACAMP1-201ENST00000434624 1035 ntBASIC2.58□□□□□ -2
APOBP04114 RPL7P28-201ENST00000437739 740 ntBASIC2.58□□□□□ -2
APOBP04114 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.58□□□□□ -2
APOBP04114 AC020893.1-201ENST00000502452 580 ntBASIC2.58□□□□□ -2
APOBP04114 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC2.58□□□□□ -2
APOBP04114 AC010653.1-201ENST00000571108 881 ntBASIC2.58□□□□□ -2
APOBP04114 AC073530.2-201ENST00000623987 261 ntBASIC2.58□□□□□ -2
APOBP04114 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 AC010733.2-201ENST00000589496 5702 ntBASIC2.58□□□□□ -2
APOBP04114 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC2.58□□□□□ -2
APOBP04114 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.58□□□□□ -2
APOBP04114 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.58□□□□□ -2
APOBP04114 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.58□□□□□ -2
APOBP04114 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
APOBP04114 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.58□□□□□ -2
APOBP04114 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.58□□□□□ -2
APOBP04114 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
APOBP04114 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC2.58□□□□□ -2
APOBP04114 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
APOBP04114 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.58□□□□□ -2
APOBP04114 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.58□□□□□ -2
APOBP04114 AL390879.2-203ENST00000426943 1121 ntBASIC2.58□□□□□ -2
APOBP04114 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.58□□□□□ -2
APOBP04114 AC110792.1-201ENST00000491826 472 ntBASIC2.58□□□□□ -2
APOBP04114 CDH12P2-201ENST00000504393 298 ntBASIC2.58□□□□□ -2
APOBP04114 AC120057.2-201ENST00000571520 271 ntBASIC2.58□□□□□ -2
APOBP04114 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
APOBP04114 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
APOBP04114 AC010329.1-201ENST00000593903 8328 ntBASIC2.58□□□□□ -2
APOBP04114 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
APOBP04114 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
APOBP04114 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms