Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 AC004241.3-201ENST00000611728 517 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 AC090772.4-201ENST00000623599 362 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.61□□□□□ -1.67
CLPTM1O96005 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.61□□□□□ -1.67
CLPTM1O96005 FRG1DP-201ENST00000635586 771 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 AC099654.8-201ENST00000637757 681 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 AL445984.1-201ENST00000637834 659 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 AC087190.4-201ENST00000574616 8334 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 PANDAR-201ENST00000629595 1506 ntBASIC4.61□□□□□ -1.67
CLPTM1O96005 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLPTM1O96005 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 AC010132.2-201ENST00000295493 1043 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 RNU1-149P-201ENST00000390870 161 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLPTM1O96005 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 HSPD1P16-201ENST00000402302 394 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 MIR1286-201ENST00000408112 78 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 BX510359.3-201ENST00000422168 306 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 RGS17P1-201ENST00000423358 553 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AL645931.1-201ENST00000439737 410 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.6□□□□□ -1.67
CLPTM1O96005 RN7SL177P-201ENST00000476596 299 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 RPL7P39-201ENST00000481157 744 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.6□□□□□ -1.67
CLPTM1O96005 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.6□□□□□ -1.67
CLPTM1O96005 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.6□□□□□ -1.67
CLPTM1O96005 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.6□□□□□ -1.67
CLPTM1O96005 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AL049779.2-201ENST00000553847 315 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 MTND6P33-201ENST00000571794 183 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.6□□□□□ -1.67
CLPTM1O96005 COX6CP4-201ENST00000605798 228 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC026741.1-201ENST00000605892 482 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC008115.4-201ENST00000619780 775 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 MIR7154-201ENST00000620673 73 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC090617.9-201ENST00000623751 147 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 CYP4F35P-202ENST00000636121 390 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 AC235565.1-201ENST00000456962 1325 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 AC010329.2-201ENST00000595195 2737 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 CASC19-261ENST00000641853 1638 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLPTM1O96005 PHKBP1-201ENST00000450951 1951 ntBASIC4.6□□□□□ -1.67
CLPTM1O96005 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.6□□□□□ -1.67
CLPTM1O96005 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AL445437.1-201ENST00000623157 3087 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLPTM1O96005 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 MIR16-2-201ENST00000362117 81 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 RNA5SP183-201ENST00000362452 119 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 MIR122-201ENST00000385044 85 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 MIR1178-201ENST00000408396 91 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.59□□□□□ -1.67
CLPTM1O96005 GAPDHP25-201ENST00000447061 1001 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC104634.1-201ENST00000452720 462 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 RPL32P14-201ENST00000463196 378 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC006967.1-201ENST00000467608 589 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 COPS8P2-201ENST00000473228 627 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC034244.2-201ENST00000514668 858 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 AP003355.1-201ENST00000518956 587 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms