Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HSPA8P18-201ENST00000439846 1928 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 RNA5SP305-201ENST00000362665 119 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 U3.2-201ENST00000362981 210 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL589647.1-201ENST00000402485 466 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 SFR1P1-201ENST00000403720 688 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 RPL7P27-201ENST00000403775 720 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 FCF1P5-201ENST00000406490 482 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 U3.36-201ENST00000408418 213 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC093084.1-201ENST00000424233 687 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 BX679664.2-201ENST00000439282 283 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL589880.1-201ENST00000448271 287 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 CCRL1P1-201ENST00000449542 1053 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL133217.1-201ENST00000450980 425 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 MTND2P14-201ENST00000482139 351 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 ST13P12-201ENST00000508958 1094 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 GTF2F2P1-201ENST00000511083 675 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC127381.1-201ENST00000555979 939 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 MIR4646-201ENST00000580775 63 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL360219.1-201ENST00000610230 366 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AP002799.1-201ENST00000623552 423 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 MTND4P4-201ENST00000439033 1366 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL022322.2-201ENST00000624072 20397 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC132825.1-201ENST00000463573 2247 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 SNORD56.4-201ENST00000363883 71 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 MIR600-201ENST00000385007 98 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 SNORD65-201ENST00000391079 73 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 RNU2-17P-201ENST00000410290 190 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 RN7SKP125-201ENST00000410481 302 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 VTI1BP4-201ENST00000427516 527 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 RPS23P9-201ENST00000448848 438 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL591623.2-201ENST00000449978 222 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC022431.1-201ENST00000450941 438 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 Z92846.1-201ENST00000456203 268 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC009127.1-201ENST00000467090 155 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 MRPS33P3-201ENST00000513456 322 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AP006245.2-201ENST00000522004 300 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC010306.1-201ENST00000523223 1117 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 OR4A2P-201ENST00000527276 913 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC024940.3-201ENST00000538551 316 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC021483.2-201ENST00000567415 758 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms