Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL359922.3-201ENST00000624779 1670 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 RNU4-39P-201ENST00000362455 127 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL645733.1-201ENST00000402250 217 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC114755.2-201ENST00000413520 361 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC073464.3-201ENST00000422564 712 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 FABP7P2-201ENST00000429946 379 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 MTCO1P52-201ENST00000433928 531 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 TPMTP4-201ENST00000450749 678 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 RPL7P48-201ENST00000461513 746 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 RN7SL329P-201ENST00000467740 299 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 RN7SL558P-201ENST00000497468 299 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 GAPDHP56-201ENST00000506031 988 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC110775.1-201ENST00000513721 462 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 RNU6-709P-201ENST00000517257 104 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 OR5AZ1P-201ENST00000527448 943 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AP000676.2-201ENST00000529711 301 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC008033.2-201ENST00000542626 177 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC110743.1-201ENST00000584870 478 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL121932.1-201ENST00000605542 214 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 RN7SKP125-201ENST00000410481 302 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 RNU4-74P-201ENST00000411280 161 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 OR2AM1P-201ENST00000422137 422 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AL451139.1-201ENST00000434718 346 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 SUMO2P1-206ENST00000445436 284 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC234781.3-201ENST00000452540 973 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 OR52A4P-201ENST00000472867 958 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC010285.3-201ENST00000511668 676 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 RNA5SP392-201ENST00000516905 112 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 GCSHP4-201ENST00000538792 439 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC087477.6-201ENST00000559595 843 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AC012557.1-201ENST00000607115 611 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AL022401.1-201ENST00000619498 108 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AL023881.1-201ENST00000621088 301 ntBASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA9Q9UGM1 MAPK10-263ENST00000641052 4307 ntBASIC4.37□□□□□ -1.71
CHRNA9Q9UGM1 SAGE2P-201ENST00000420011 2126 ntBASIC4.37□□□□□ -1.71
CHRNA9Q9UGM1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms