Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AL022578.1-201ENST00000439330 1433 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 STAG3L4-201ENST00000352103 530 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 OR52E6-202ENST00000379946 954 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AL136131.1-201ENST00000406079 803 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 PNKDP1-201ENST00000435914 430 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC097463.1-201ENST00000447288 481 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC019235.1-201ENST00000503847 207 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 HMGB1P28-201ENST00000507778 552 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 NDUFB4P2-201ENST00000509515 391 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 RNU6-1261P-201ENST00000517194 104 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 MRPS21P8-201ENST00000569196 235 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC090312.2-201ENST00000582687 378 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 DYNLL1P1-201ENST00000595442 269 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC008277.2-201ENST00000605196 797 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 MIR6071-201ENST00000616741 78 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC023509.5-201ENST00000617434 807 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 GUCY1B2-204ENST00000531898 1979 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 MTND4P16-201ENST00000466108 1367 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CNTN3Q9P232 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNTN3Q9P232 AL034370.1-201ENST00000397254 1590 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 AC027575.3-201ENST00000583058 2747 ntBASIC6.78□□□□□ -1.32
CNTN3Q9P232 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
CNTN3Q9P232 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.77□□□□□ -1.32
CNTN3Q9P232 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 RARSP1-201ENST00000542842 1418 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 RNA5SP110-201ENST00000362638 115 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 RNU6-492P-201ENST00000363035 104 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 RNU1-49P-201ENST00000363468 159 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 RNA5SP478-201ENST00000364657 115 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 OR7E101P-201ENST00000400428 513 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 RPS24P12-201ENST00000402084 394 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 GSTA9P-201ENST00000406231 611 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AL512422.1-201ENST00000407033 553 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 MIR1303-201ENST00000408625 86 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 RN7SKP144-201ENST00000411108 279 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 RPL37P21-201ENST00000435890 276 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 PCBP2P1-201ENST00000437262 977 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 RPS4XP4-201ENST00000443195 763 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 USP9YP12-201ENST00000450481 570 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 VDAC2P4-201ENST00000452925 711 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC099521.1-201ENST00000482557 334 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC098799.3-201ENST00000506095 438 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms