Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LRRC37A16P-202ENST00000586022 3725 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CAP1P2-201ENST00000417455 1409 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 EEF1A1P2-201ENST00000553854 1447 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MTND5P3-201ENST00000438536 1800 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC109446.4-201ENST00000623235 2755 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 PHKBP1-201ENST00000450951 1951 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 NLRP3P1-201ENST00000622303 1785 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 AL138713.1-201ENST00000624026 2130 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 MTND5P16-201ENST00000460269 1703 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 ACTR3BP5-201ENST00000448440 1479 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 ZNF300P1-201ENST00000356555 1822 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 OR5P1P-201ENST00000299512 925 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RN7SKP44-201ENST00000363602 316 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 U3.11-201ENST00000364476 212 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RNU6-522P-201ENST00000364497 107 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 COX17P1-201ENST00000378775 192 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RNU6-1013P-201ENST00000384180 107 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 SNORA7.3-201ENST00000384186 139 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 RNU6-463P-201ENST00000384340 107 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 MIR558-201ENST00000384920 94 ntBASIC1.97□□□□□ -2.09
LCE3DQ9BYE3 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms