Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNA5SP187-201ENST00000384400 119 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 COX5BP7-201ENST00000414780 274 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AC090686.1-201ENST00000481577 749 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AC010306.1-201ENST00000523223 1117 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 TVP23CP2-201ENST00000571473 623 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AL445222.1-201ENST00000607259 628 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AL353662.3-201ENST00000625131 237 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 AL031595.2-201ENST00000624215 19071 ntBASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHMP4AQ9BY43 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 SNORA51.12-201ENST00000384448 134 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC007394.1-201ENST00000421941 531 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 PRPF38AP2-201ENST00000438179 851 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 RPS29P9-201ENST00000440360 171 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 MTND2P6-201ENST00000455337 1030 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC096992.1-201ENST00000459808 709 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC140172.1-201ENST00000502928 141 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 PRELID3BP7-201ENST00000503606 469 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AP001922.4-201ENST00000526967 290 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 NTAN1P1-201ENST00000603150 646 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC105254.2-201ENST00000603636 436 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 OR2BH1P-201ENST00000608850 864 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC108359.1-201ENST00000616451 1211 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC023509.5-201ENST00000617434 807 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC009452.1-201ENST00000640823 606 ntBASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CHMP4AQ9BY43 AC138393.1-206ENST00000540997 1886 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 NSRP1P1-201ENST00000444067 1693 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AL445487.1-201ENST00000415694 1580 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 OR51H2P-202ENST00000641424 3046 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 OR14L1P-202ENST00000641545 3009 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 RNA5SP455-201ENST00000365190 119 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AL078604.1-201ENST00000404609 466 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 UBE2V1P15-201ENST00000407776 448 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 RN7SKP97-201ENST00000410966 333 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 RBMY2QP-201ENST00000429799 1147 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 PTP4A1P3-201ENST00000433661 420 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 S100A11P1-201ENST00000477525 312 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 RN7SL319P-201ENST00000480656 221 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC006349.1-201ENST00000555526 235 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC008536.1-201ENST00000602872 669 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC010680.3-201ENST00000604215 520 ntBASIC6.49□□□□□ -1.37
CHMP4AQ9BY43 AC003001.2-201ENST00000616294 831 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms