Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AF228730.2-201ENST00000438784 848 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC079768.1-201ENST00000503181 711 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 Y_RNA.682-201ENST00000516457 100 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 OR5B10P-201ENST00000532869 642 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AL031846.1-201ENST00000560933 314 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC008269.2-201ENST00000561915 1105 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AP001029.3-201ENST00000588063 596 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AL391813.2-201ENST00000609113 322 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 uc_338.11-201ENST00000619132 160 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC026336.5-201ENST00000624455 738 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 Z69720.2-201ENST00000624755 279 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 ATM-230ENST00000640388 578 ntTSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 AP003119.3-201ENST00000566747 4192 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 RNU6-28P-201ENST00000362378 107 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 Y_RNA.135-201ENST00000363439 95 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 Y_RNA.367-201ENST00000365544 101 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 MIR99A-201ENST00000384906 81 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 RNU6-308P-201ENST00000390957 107 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 RPS4XP9-201ENST00000405151 780 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 RNU4-14P-201ENST00000410858 122 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 RN7SKP268-201ENST00000411107 316 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 OR6C66P-201ENST00000414917 930 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 OR4K11P-201ENST00000431829 904 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC114495.1-201ENST00000441274 436 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AL451074.4-201ENST00000447545 470 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 ELOCP24-201ENST00000456370 334 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 MTCYBP40-201ENST00000509390 1135 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 SUMO2P20-201ENST00000520803 283 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC023442.1-201ENST00000531247 422 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AP002404.1-201ENST00000532005 451 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 OR4K8P-201ENST00000578842 1048 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 GLUD1P2-201ENST00000583339 201 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 GLUD1P8-201ENST00000585063 203 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 GLUD1P4-201ENST00000590914 418 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC104184.1-201ENST00000607513 721 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 OR6R2P-201ENST00000609216 300 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 uc_338.12-201ENST00000616344 181 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC096861.1-201ENST00000616652 240 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 MIR6886-201ENST00000619864 61 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 MIR6503-201ENST00000622884 86 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
PHOX2BQ99453 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PHOX2BQ99453 AC016930.1-201ENST00000468766 2205 ntBASIC7.48□□□□□ -1.21
PHOX2BQ99453 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms