Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 RN7SKP269-201ENST00000365545 319 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 RNU2-17P-201ENST00000410290 190 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 RNU4-34P-201ENST00000410431 124 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 GTF3AP1-201ENST00000416942 1004 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 EIF4A1P1-201ENST00000420241 934 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 FABP7P2-201ENST00000429946 379 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL513321.1-201ENST00000441175 761 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL353093.1-201ENST00000441292 436 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 NIP7P2-201ENST00000485801 544 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 COL6A4P2-205ENST00000509855 506 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC087477.6-201ENST00000559595 843 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 RN7SL802P-201ENST00000577858 299 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC040174.2-201ENST00000602701 465 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC092953.2-201ENST00000608000 699 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC091905.4-201ENST00000623432 202 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AL163152.1-201ENST00000642001 374 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM5Q96HC4 AC083843.3-201ENST00000623679 2186 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 ARL4AP5-201ENST00000404372 599 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AP000357.1-201ENST00000409926 1165 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 RN7SKP213-201ENST00000410746 298 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 CHEK2P3-201ENST00000416118 248 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 MTCO3P4-201ENST00000419236 787 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 BX510359.3-201ENST00000422168 306 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AL691517.1-201ENST00000440833 1235 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC104651.2-201ENST00000447549 528 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 MTND2P8-201ENST00000450555 1025 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC112206.1-201ENST00000468416 477 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 RPSAP50-201ENST00000481955 852 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 RN7SL591P-201ENST00000496150 292 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 RNU6-467P-201ENST00000517027 110 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 IGLV2-28-201ENST00000520681 304 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC008033.2-201ENST00000542626 177 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms