Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC091178.1-203ENST00000584586 279 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AP001160.4-201ENST00000596971 382 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC234782.5-201ENST00000617723 324 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 AC002044.3-201ENST00000623314 541 ntBASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ECHDC3Q96DC8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 RNA5SP151-201ENST00000365632 117 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 NCSTNP1-201ENST00000406229 144 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AL732292.1-201ENST00000426692 226 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 RPL23AP37-201ENST00000479658 549 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AF186190.1-201ENST00000517470 480 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 C1GALT1P3-201ENST00000522049 819 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC022616.2-201ENST00000523185 300 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AL356218.2-201ENST00000605264 187 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AC097505.1-201ENST00000610199 565 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 OR2L1P-202ENST00000641567 1023 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 LINC01808-202ENST00000641680 1116 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.52□□□□□ -1.69
ECHDC3Q96DC8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC139713.2-214ENST00000642059 1811 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC139769.1-204ENST00000472297 1931 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 RNA5SP447-201ENST00000363749 119 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 RNU1-130P-201ENST00000363930 160 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 RPS12P10-201ENST00000427031 377 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC012671.1-201ENST00000451912 203 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 MTND2P28-201ENST00000457540 1044 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 RPL21P126-201ENST00000470049 478 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 RNA5SP360-201ENST00000516555 118 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 NPM1P52-201ENST00000518264 846 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC020634.1-201ENST00000608701 549 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 AC006065.6-201ENST00000625201 545 ntBASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ECHDC3Q96DC8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms