Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN4BQ8IWT1 SAMMSON-213ENST00000641336 1521 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 MIR142-201ENST00000384835 87 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 MIR320B1-201ENST00000390209 79 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 RNA5SP498-201ENST00000411342 120 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AL354766.1-201ENST00000423396 542 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AL360081.1-201ENST00000428299 555 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC093422.3-201ENST00000428506 305 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AL049745.1-201ENST00000433953 286 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC092685.1-201ENST00000447960 1243 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC002553.2-201ENST00000453217 340 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC105233.1-201ENST00000498840 781 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC027369.5-201ENST00000533838 755 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC009117.1-201ENST00000563948 554 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 PRPF19P1-201ENST00000584766 898 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC005377.1-201ENST00000605126 456 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC011374.2-201ENST00000607135 526 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 CYCSP41-201ENST00000616920 296 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AP001029.2-203ENST00000589795 4910 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 AC019072.1-201ENST00000604535 1551 ntBASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN4BQ8IWT1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 ZNF602P-201ENST00000405929 924 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC023128.2-201ENST00000420880 1223 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 ETF1P3-201ENST00000430422 1160 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC008072.1-201ENST00000434254 824 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 TXNP5-201ENST00000441043 315 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 FHP1-201ENST00000442741 703 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 GAPDHP14-201ENST00000450472 937 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC243772.1-201ENST00000451620 410 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 MTCO1P18-201ENST00000455518 1419 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC005412.2-201ENST00000492004 341 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 RN7SL591P-201ENST00000496150 292 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC108471.1-201ENST00000513977 287 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 RNU6-276P-201ENST00000516114 96 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 RNU6-1004P-201ENST00000516584 111 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 GCSHP4-201ENST00000538792 439 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 MTCYBP13-201ENST00000578634 1093 ntBASIC5.27□□□□□ -1.57
SCN4BQ8IWT1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms