Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 MTND1P9-201ENST00000453775 944 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC106872.3-201ENST00000495104 446 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC104136.1-201ENST00000512969 394 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC105417.1-201ENST00000514691 285 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 RNU4-49P-201ENST00000516080 140 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 SCARNA11.1-201ENST00000516918 132 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AP006587.5-201ENST00000532033 739 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AL109628.1-201ENST00000556877 366 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 TPMTP1-201ENST00000592307 737 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC020914.7-201ENST00000594477 545 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC084781.2-201ENST00000615568 161 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AL138693.1-201ENST00000622219 129 ntBASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
LYSMD3Q7Z3D4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
LYSMD3Q7Z3D4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 WBP11P1-201ENST00000562560 1931 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 OR10D1P-201ENST00000355343 936 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 Y_RNA.31-201ENST00000362574 102 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 Y_RNA.395-201ENST00000383945 109 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC245036.1-201ENST00000391727 309 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 NDUFB4P5-201ENST00000415445 361 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 MTND2P29-201ENST00000438595 412 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-329P-201ENST00000459618 107 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RPSAP24-201ENST00000461543 873 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RN7SL283P-201ENST00000489055 303 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC138409.2-202ENST00000507274 458 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 PCBP2P3-201ENST00000509726 843 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 SNORA40.12-201ENST00000516329 111 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RN7SKP256-201ENST00000517201 314 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 TPM3P3-201ENST00000521343 354 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AP003122.3-201ENST00000526316 255 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 PSMA2P1-201ENST00000526365 646 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AP003181.2-201ENST00000528941 181 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC008966.2-201ENST00000606157 453 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AL365434.2-201ENST00000607979 234 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC092807.2-201ENST00000609367 243 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RFPL4AP6-201ENST00000616792 846 ntBASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms