Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 THAP12P4-201ENST00000528321 2266 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 U8.4-201ENST00000363626 134 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 RNU1-87P-201ENST00000363727 170 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 MIR765-201ENST00000390226 114 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC005522.1-201ENST00000395416 346 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL450992.3-201ENST00000413192 568 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 DDX39BP1-205ENST00000422507 192 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL031736.2-201ENST00000426573 787 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 KNOP1P3-201ENST00000446933 426 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL645937.3-201ENST00000453647 936 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 RPL37P3-201ENST00000456825 293 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 RN7SL443P-201ENST00000464331 290 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC011037.1-201ENST00000483964 558 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC109462.1-201ENST00000491087 368 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 RN7SKP66-201ENST00000516681 231 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 CIR1P1-201ENST00000524055 1133 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL359219.2-201ENST00000555184 348 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 OR11J2P-201ENST00000555298 907 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 MTND4LP24-201ENST00000572277 291 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC115085.1-201ENST00000588924 229 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC006116.3-201ENST00000592968 361 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 DNAJC19P3-201ENST00000594491 331 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 MIR8084-201ENST00000614105 89 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC016769.4-201ENST00000616893 535 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 LINC00901.1-201ENST00000617252 152 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AP000648.2-201ENST00000624182 404 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AC134882.1-201ENST00000603738 1676 ntBASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC120338.1-201ENST00000625074 1541 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 SNORA63.3-201ENST00000362682 132 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 HMGB1P13-201ENST00000406019 642 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AL390316.1-201ENST00000406279 553 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AP000357.1-201ENST00000409926 1165 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 RNU4-27P-201ENST00000410889 139 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AL158050.1-201ENST00000416077 457 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 RWDD4P2-201ENST00000426392 563 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AL512637.2-201ENST00000431287 1256 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AL035458.1-201ENST00000433096 585 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AL353093.1-201ENST00000441292 436 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 RPS27P5-201ENST00000444247 244 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC092647.2-201ENST00000452998 253 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC108161.1-201ENST00000461060 402 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC110749.1-201ENST00000462007 357 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC092902.1-201ENST00000486999 259 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 RN7SL441P-201ENST00000492388 296 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC008953.1-201ENST00000497334 318 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms