Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC124945.1-201ENST00000485133 188 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC026412.2-201ENST00000512270 1075 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 SNORA19.2-201ENST00000516013 114 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 MIR4489-201ENST00000578869 62 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC091488.1-201ENST00000604239 660 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL359704.2-201ENST00000604335 521 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL136131.3-201ENST00000607600 188 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL133215.3-201ENST00000609801 448 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC108479.2-201ENST00000617314 601 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 CRYM-AS1-204ENST00000637983 556 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 VN2R3P-201ENST00000422626 1412 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 ICE2P1-201ENST00000512800 1849 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AP001350.1-201ENST00000601906 1524 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.146-201ENST00000363549 102 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 SNORD65.1-201ENST00000390889 71 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL354890.1-201ENST00000413730 346 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 RPS7P15-201ENST00000415804 584 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC093155.2-201ENST00000420734 937 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 BX323845.3-201ENST00000428215 527 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 Z98949.2-201ENST00000440996 144 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL353898.1-201ENST00000444055 238 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL583843.1-201ENST00000456070 346 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 RPL38P1-201ENST00000460914 211 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL122020.1-201ENST00000472287 459 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC023598.1-201ENST00000472521 361 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 MTND6P2-201ENST00000512226 524 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 RN7SKP13-201ENST00000515933 244 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC112191.2-201ENST00000522428 333 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 IGLV3-6-201ENST00000523937 250 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC137768.1-201ENST00000549998 553 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 HIF1AP1-201ENST00000553642 175 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC091078.2-201ENST00000557145 559 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 ATP5F1P7-201ENST00000567330 760 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL136363.1-201ENST00000605349 337 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AL132640.3-201ENST00000630473 177 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC116667.2-201ENST00000641075 823 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 AC119674.1-207ENST00000641355 633 ntBASIC7.9□□□□□ -1.14
RC3H1Q5TC82 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RC3H1Q5TC82 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RC3H1Q5TC82 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RC3H1Q5TC82 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RC3H1Q5TC82 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RC3H1Q5TC82 AL359976.1-201ENST00000418655 3528 ntBASIC7.9□□□□□ -1.15
RC3H1Q5TC82 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
RC3H1Q5TC82 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.9□□□□□ -1.15
RC3H1Q5TC82 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 UGT2B26P-201ENST00000508672 1613 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms