Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
PTCHD3Q3KNS1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AP001029.2-203ENST00000589795 4910 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC017079.1-201ENST00000333650 415 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 RNU6-83P-201ENST00000384568 112 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 MIR1286-201ENST00000408112 78 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 GPS2P1-201ENST00000411761 986 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 LINC01881-201ENST00000416103 412 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 NANOGP4-201ENST00000427230 913 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 RPL12P17-201ENST00000432393 498 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC005002.1-201ENST00000447458 540 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 RNU7-27P-201ENST00000459281 62 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC026348.1-201ENST00000462549 1053 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 RN7SL515P-201ENST00000463999 297 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC091951.3-201ENST00000504093 246 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 OR4A43P-201ENST00000532938 908 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 GCSHP4-201ENST00000538792 439 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AL360219.1-201ENST00000610230 366 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 AL139407.1-201ENST00000613826 1175 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 MIR3974-201ENST00000637126 96 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCHD3Q3KNS1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC006042.3-201ENST00000454684 1469 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC007342.5-201ENST00000571340 2142 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC068870.3-201ENST00000625077 2536 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 FAM133CP-201ENST00000332869 704 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 SNORA62.2-201ENST00000364672 152 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 SFR1P1-201ENST00000403720 688 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 BRWD1P3-201ENST00000428816 390 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 CDY14P-201ENST00000431260 1014 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 RPL7L1P9-201ENST00000431298 745 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 CDY12P-201ENST00000440679 1015 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 CDY13P-201ENST00000445813 1015 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AL672138.1-201ENST00000450604 1015 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 CDY23P-201ENST00000451661 1014 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC092754.1-201ENST00000472975 479 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 RPS3AP22-201ENST00000488297 769 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 IGBP1P4-201ENST00000503202 879 ntBASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD3Q3KNS1 AC021193.1-201ENST00000511607 420 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms